RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 LILRA6Q6PI73 481 aa11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 OSR2Q8N2R0 312 aa11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 PPP1R35Q8TAP8 253 aa11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 VN1R1Q9GZP7 353 aa11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 ZNF586Q9NXT0 402 aa11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 SPRY1O43609 319 aaPredicted RBP11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 ZBTB25P24278 435 aa11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 FKBP2P26885 142 aaKnown RBP11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 RPL29P47914 159 aaKnown RBP11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 SULT1A2P50226 295 aa11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 C1QL3Q5VWW1 255 aa11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 NR2C2APQ86WQ0 139 aa11.69□□□□□ -0.54
PCDHGB3-201ENST00000576222 TRBV5-5A0A0J9YX44 114 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 WDR1O75083 606 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 CTSDP07339 412 aaPredicted RBP11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 ACOT6Q3I5F7 207 aaPredicted RBP11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 DHRS7BQ6IAN0 325 aaPredicted RBP11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 CDCA3Q99618 268 aaPredicted RBP11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 MFRPQ9BY79 579 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 LRRC37AA6NMS7 1700 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 SCRG1O75711 98 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 SEC11BP0C7V7 166 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 PGA3P0DJD8 388 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 VSIG8P0DPA2 414 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 GLULP15104 373 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 KIR3DL2P43630 455 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 PKIAP61925 76 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 FOXF1Q12946 379 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 TMEM255AQ5JRV8 349 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 DRAM2Q6UX65 266 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 ZDHHC11Q9H8X9 412 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 MRPS18BQ9Y676 258 aaKnown RBP11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 C20orf202A1L168 122 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 CDRT15L2A8MXV6 281 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 HS3ST1O14792 307 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 GDF1P27539 372 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 DLK1P80370 383 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 CD226Q15762 336 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 RAB30Q15771 203 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 BTNL8Q6UX41 500 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 FBXL14Q8N1E6 418 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 VSTM2LQ96N03 204 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 HEYLQ9NQ87 328 aaPredicted RBP11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 MCTS1Q9ULC4 181 aaKnown RBP11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 H3BQ15 152 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 RER1O15258 196 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 OPN1MWP04001 364 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 OPN1MW2P0DN77 364 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 OPN1MW3P0DN78 364 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 COX5AP20674 150 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 FZD2Q14332 565 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 PHYHD1Q5SRE7 291 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 PPP1R3BQ86XI6 285 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 SIGLECL1Q8N7X8 197 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 SHDQ96IW2 340 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 SNX22Q96L94 193 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 FAAP24Q9BTP7 215 aa11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 RCC2Q9P258 522 aaKnown RBP11.68□□□□□ -0.54
PCDHGB3-201ENST00000576222 TRBV23-1A0A0A0MS06 115 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 PTBP3O95758 552 aaKnown RBP11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 CARD18P57730 90 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 SELENOVP59797 346 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 PMP22Q01453 160 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 PMS2P11Q13670 270 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 SLC25A26Q70HW3 274 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 MRPL24Q96A35 216 aaKnown RBP11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 REEP6Q96HR9 211 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 MRGPRX4Q96LA9 322 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 GPR87Q9BY21 358 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 OR5AC2Q9NZP5 309 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 DCDP81605 110 aaKnown RBP11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 PNRC1Q12796 327 aaPredicted RBP11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 TMEM241Q24JQ0 296 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 NOXO1Q8NFA2 376 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 OR10P1Q8NGE3 313 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 OR8U1Q8NH10 309 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 APOBEC4Q8WW27 367 aaKnown RBP11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 RDH5Q92781 318 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 PINX1Q96BK5 328 aaKnown RBP11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 POM121Q96HA1 1249 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 HEXA-AS1Q9H8Q6 139 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 PPP1R3CQ9UQK1 317 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 A0A1W2PPC1 479 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 PLPP3O14495 311 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 LIMK1P53667 647 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 RANP62826 216 aaKnown RBP11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 UBE2V2Q15819 145 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 TOMM20LQ6UXN7 152 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 PTX4Q96A99 478 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 CD207Q9UJ71 328 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 OR5H15A6NDH6 313 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 OR5H1A6NKK0 313 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 F6UZH7 168 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 EFSO43281 561 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 P2RY1P47900 373 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 EIF4E3Q8N5X7 224 aaKnown RBP11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 KISS1RQ969F8 398 aaPredicted RBP11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 PARD6AQ9NPB6 346 aa11.67□□□□□ -0.54
PCDHGB3-201ENST00000576222 M0R143 59 aa11.66□□□□□ -0.54
PCDHGB3-201ENST00000576222 DHHO43323 396 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms