RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 MLNRO43193 412 aa8.12□□□□□ -1.11
NPLOC4-216ENST00000574344 UPK1BO75841 260 aa8.12□□□□□ -1.11
NPLOC4-216ENST00000574344 ARL6IP5O75915 188 aa8.12□□□□□ -1.11
NPLOC4-216ENST00000574344 GYPBP06028 91 aa8.12□□□□□ -1.11
NPLOC4-216ENST00000574344 SPARCP09486 303 aa8.12□□□□□ -1.11
NPLOC4-216ENST00000574344 FPR2P25090 351 aa8.12□□□□□ -1.11
NPLOC4-216ENST00000574344 ZFP36P26651 326 aaKnown RBP8.12□□□□□ -1.11
NPLOC4-216ENST00000574344 HILS1P60008 231 aa8.12□□□□□ -1.11
NPLOC4-216ENST00000574344 SEC61A1P61619 476 aaKnown RBP8.12□□□□□ -1.11
NPLOC4-216ENST00000574344 FABP5Q01469 135 aa8.12□□□□□ -1.11
NPLOC4-216ENST00000574344 MXD1Q05195 221 aa8.12□□□□□ -1.11
NPLOC4-216ENST00000574344 GK2Q14410 553 aaPredicted RBP8.12□□□□□ -1.11
NPLOC4-216ENST00000574344 OR8G1Q15617 311 aa8.12□□□□□ -1.11
NPLOC4-216ENST00000574344 PLEKHG7Q6ZR37 379 aa8.12□□□□□ -1.11
NPLOC4-216ENST00000574344 SLC16A9Q7RTY1 509 aa8.12□□□□□ -1.11
NPLOC4-216ENST00000574344 LRRC28Q86X40 367 aaPredicted RBP8.12□□□□□ -1.11
NPLOC4-216ENST00000574344 EGFL6Q8IUX8 553 aa8.12□□□□□ -1.11
NPLOC4-216ENST00000574344 ZNF485Q8NCK3 441 aa8.12□□□□□ -1.11
NPLOC4-216ENST00000574344 ACOT12Q8WYK0 555 aa8.12□□□□□ -1.11
NPLOC4-216ENST00000574344 C1QTNF5Q9BXJ0 243 aa8.12□□□□□ -1.11
NPLOC4-216ENST00000574344 N6AMT1Q9Y5N5 214 aa8.12□□□□□ -1.11
NPLOC4-216ENST00000574344 AUP1Q9Y679 476 aa8.12□□□□□ -1.11
NPLOC4-216ENST00000574344 PPIAL4EA0A075B759 164 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 PPIAL4CA0A0B4J2A2 164 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 GGT3PA6NGU5 568 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 ZNF879B4DU55 563 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 PPIAL4DF5H284 164 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 SULT1C4O75897 302 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 PTTG1O95997 202 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 KRT8P05787 483 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 PPIAL4FP0DN26 164 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 CLUP10909 449 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 MAPK3P27361 379 aaPredicted RBP8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 TALDO1P37837 337 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 RPS19P39019 145 aaKnown RBP8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 GNB2P62879 340 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 ZNF85Q03923 595 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 CDONQ4KMG0 1287 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 RPL22L1Q6P5R6 122 aaKnown RBP8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 LYPD4Q6UWN0 246 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 RBMS3Q6XE24 437 aaKnown RBP8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 Q6ZNX1 250 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 SPATC1Q76KD6 591 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 NLRC3Q7RTR2 1065 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 DCXRQ7Z4W1 244 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 KCTD20Q7Z5Y7 419 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 NAA40Q86UY6 237 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 TPRA1Q86W33 373 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 CENPSQ8N2Z9 138 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 PARP16Q8N5Y8 322 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 OR11L1Q8NGX0 322 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 OR2AE1Q8NHA4 323 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 GCDHQ92947 438 aaPredicted RBP8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 SMIM19Q96E16 107 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 MAP6Q96JE9 813 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 INTS14Q96SY0 518 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 ADAT1Q9BUB4 502 aaKnown RBP8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 SSBP3Q9BWW4 388 aaPredicted RBP8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 NMNAT2Q9BZQ4 307 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 PNRC2Q9NPJ4 139 aaKnown RBP8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 MMP26Q9NRE1 261 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 ABCB10Q9NRK6 738 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 CENPMQ9NSP4 180 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 UFSP2Q9NUQ7 469 aa8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 SF3B6Q9Y3B4 125 aaKnown RBP8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 NOP16Q9Y3C1 178 aaKnown RBP8.11□□□□□ -1.11
NPLOC4-216ENST00000574344 A0A1B0GVG6 124 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 A8MXK9 166 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 ZNF878C9JN71 531 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 F5H0A9 414 aaPredicted RBP8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 TBX1O43435 398 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 GATBO75879 557 aaKnown RBP8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 CD1AP06126 327 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 SLC2A1P11166 492 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 CA6P23280 308 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 HSD11B1P28845 292 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 PRKXP51817 358 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 ZNF154Q13106 437 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 CDK5R1Q15078 307 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 RSPO1Q2MKA7 263 aaPredicted RBP8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 SNAI3Q3KNW1 292 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 TP53I3Q53FA7 332 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 FAM201AQ5SY85 155 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 PRAMEF6Q5VXH4 476 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 DRAM2Q6UX65 266 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 FAM131AQ6UXB0 335 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 BTNL3Q6UXE8 466 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 DCDC5Q6ZRR9 648 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 COLCA1Q6ZS62 124 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 CCDC190Q86UF4 302 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 BOLLQ8N9W6 283 aaKnown RBP8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 DEFB108BQ8NET1 73 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 OR8B3Q8NGG8 313 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 OR10S1Q8NGN2 331 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 OR6N2Q8NGY6 317 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 SETD6Q8TBK2 473 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 PHYHIPQ92561 330 aa8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 DVL3Q92997 716 aaPredicted RBP8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 KCTD12Q96CX2 325 aaKnown RBP8.1□□□□□ -1.11
NPLOC4-216ENST00000574344 SLAMF6Q96DU3 332 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms