RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 MEX3AA1L020 520 aaKnown RBP14.08□□□□□ -0.16
CCDC40-211ENST00000574099 HMGB1P1B2RPK0 211 aaPredicted RBP14.08□□□□□ -0.16
CCDC40-211ENST00000574099 CST4P01036 141 aa14.08□□□□□ -0.16
CCDC40-211ENST00000574099 APOC1P02654 83 aa14.08□□□□□ -0.16
CCDC40-211ENST00000574099 ALDOBP05062 364 aa14.08□□□□□ -0.16
CCDC40-211ENST00000574099 PIPP12273 146 aaPredicted RBP14.08□□□□□ -0.16
CCDC40-211ENST00000574099 COX4I1P13073 169 aa14.08□□□□□ -0.16
CCDC40-211ENST00000574099 SPI1P17947 270 aa14.08□□□□□ -0.16
CCDC40-211ENST00000574099 RRM2P31350 389 aa14.08□□□□□ -0.16
CCDC40-211ENST00000574099 NUDT2P50583 147 aa14.08□□□□□ -0.16
CCDC40-211ENST00000574099 TCTEX1D4Q5JR98 221 aa14.08□□□□□ -0.16
CCDC40-211ENST00000574099 CEP78Q5JTW2 689 aa14.08□□□□□ -0.16
CCDC40-211ENST00000574099 ERI1Q8IV48 349 aaKnown RBP14.08□□□□□ -0.16
CCDC40-211ENST00000574099 CD177Q8N6Q3 437 aa14.08□□□□□ -0.16
CCDC40-211ENST00000574099 RP9Q8TA86 221 aaKnown RBP14.08□□□□□ -0.16
CCDC40-211ENST00000574099 RNF133Q8WVZ7 376 aa14.08□□□□□ -0.16
CCDC40-211ENST00000574099 FOXRED1Q96CU9 486 aaPredicted RBP14.08□□□□□ -0.16
CCDC40-211ENST00000574099 LYZL4Q96KX0 146 aa14.08□□□□□ -0.16
CCDC40-211ENST00000574099 RGCCQ9H4X1 137 aa14.08□□□□□ -0.16
CCDC40-211ENST00000574099 INPP5EQ9NRR6 644 aa14.08□□□□□ -0.16
CCDC40-211ENST00000574099 RFPL4AA6NLU0 287 aa14.07□□□□□ -0.16
CCDC40-211ENST00000574099 ZNF732B4DXR9 585 aa14.07□□□□□ -0.16
CCDC40-211ENST00000574099 RFPL4AL1F8VTS6 287 aa14.07□□□□□ -0.16
CCDC40-211ENST00000574099 F2RL2O00254 374 aa14.07□□□□□ -0.16
CCDC40-211ENST00000574099 EGFEM1PQ0D2K5 195 aa14.07□□□□□ -0.16
CCDC40-211ENST00000574099 OR9Q2Q8NGE9 314 aa14.07□□□□□ -0.16
CCDC40-211ENST00000574099 OR2T27Q8NH04 317 aa14.07□□□□□ -0.16
CCDC40-211ENST00000574099 MYDGFQ969H8 173 aa14.07□□□□□ -0.16
CCDC40-211ENST00000574099 ZNF488Q96MN9 340 aa14.07□□□□□ -0.16
CCDC40-211ENST00000574099 HIST1H2AAQ96QV6 131 aa14.07□□□□□ -0.16
CCDC40-211ENST00000574099 C1orf21Q9H246 121 aa14.07□□□□□ -0.16
CCDC40-211ENST00000574099 TBC1D23Q9NUY8 699 aa14.07□□□□□ -0.16
CCDC40-211ENST00000574099 TBL2Q9Y4P3 447 aaKnown RBP14.07□□□□□ -0.16
CCDC40-211ENST00000574099 LRP12Q9Y561 859 aa14.07□□□□□ -0.16
CCDC40-211ENST00000574099 TSSC4Q9Y5U2 329 aaPredicted RBP14.07□□□□□ -0.16
CCDC40-211ENST00000574099 ODF3BA8MYP8 253 aa14.06□□□□□ -0.16
CCDC40-211ENST00000574099 MTRF1O75570 445 aaKnown RBP14.06□□□□□ -0.16
CCDC40-211ENST00000574099 DUS4LO95620 317 aaKnown RBP14.06□□□□□ -0.16
CCDC40-211ENST00000574099 SEMG1P04279 462 aa14.06□□□□□ -0.16
CCDC40-211ENST00000574099 H2BFMP0C1H6 154 aa14.06□□□□□ -0.16
CCDC40-211ENST00000574099 OPRL1P41146 370 aa14.06□□□□□ -0.16
CCDC40-211ENST00000574099 GNG3P63215 75 aa14.06□□□□□ -0.16
CCDC40-211ENST00000574099 DYNC1I2Q13409 638 aaKnown RBP14.06□□□□□ -0.16
CCDC40-211ENST00000574099 RPL13AP3Q6NVV1 102 aa14.06□□□□□ -0.16
CCDC40-211ENST00000574099 CENPVQ7Z7K6 275 aaPredicted RBP14.06□□□□□ -0.16
CCDC40-211ENST00000574099 RNF148Q8N7C7 305 aa14.06□□□□□ -0.16
CCDC40-211ENST00000574099 DPF1Q92782 380 aa14.06□□□□□ -0.16
CCDC40-211ENST00000574099 MALSU1Q96EH3 234 aa14.06□□□□□ -0.16
CCDC40-211ENST00000574099 INTS14Q96SY0 518 aa14.06□□□□□ -0.16
CCDC40-211ENST00000574099 NMNAT2Q9BZQ4 307 aa14.06□□□□□ -0.16
CCDC40-211ENST00000574099 OR51I2Q9H344 312 aa14.06□□□□□ -0.16
CCDC40-211ENST00000574099 HILPDAQ9Y5L2 63 aa14.06□□□□□ -0.16
CCDC40-211ENST00000574099 SLC1A7O00341 560 aa14.05□□□□□ -0.16
CCDC40-211ENST00000574099 SLC22A2O15244 555 aa14.05□□□□□ -0.16
CCDC40-211ENST00000574099 CLIC3O95833 236 aa14.05□□□□□ -0.16
CCDC40-211ENST00000574099 LINC01590Q5TEZ4 76 aa14.05□□□□□ -0.16
CCDC40-211ENST00000574099 HAGHLQ6PII5 290 aaPredicted RBP14.05□□□□□ -0.16
CCDC40-211ENST00000574099 ACP7Q6ZNF0 438 aa14.05□□□□□ -0.16
CCDC40-211ENST00000574099 BATF2Q8N1L9 274 aa14.05□□□□□ -0.16
CCDC40-211ENST00000574099 OR4Q3Q8NH05 313 aa14.05□□□□□ -0.16
CCDC40-211ENST00000574099 ZNF671Q8TAW3 534 aa14.05□□□□□ -0.16
CCDC40-211ENST00000574099 FAM81AQ8TBF8 368 aa14.05□□□□□ -0.16
CCDC40-211ENST00000574099 AQP3Q92482 292 aa14.05□□□□□ -0.16
CCDC40-211ENST00000574099 PYURFQ96I23 114 aa14.05□□□□□ -0.16
CCDC40-211ENST00000574099 BTBD10Q9BSF8 475 aa14.05□□□□□ -0.16
CCDC40-211ENST00000574099 TSSK6Q9BXA6 273 aa14.05□□□□□ -0.16
CCDC40-211ENST00000574099 MED20Q9H944 212 aa14.05□□□□□ -0.16
CCDC40-211ENST00000574099 ABCD2Q9UBJ2 740 aa14.05□□□□□ -0.16
CCDC40-211ENST00000574099 NDUFAB1O14561 156 aa14.04□□□□□ -0.16
CCDC40-211ENST00000574099 GMNNO75496 209 aa14.04□□□□□ -0.16
CCDC40-211ENST00000574099 CCDC159P0C7I6 412 aa14.04□□□□□ -0.16
CCDC40-211ENST00000574099 SLC34A1Q06495 639 aa14.04□□□□□ -0.16
CCDC40-211ENST00000574099 SMIM21Q3B7S5 101 aa14.04□□□□□ -0.16
CCDC40-211ENST00000574099 ZNF626Q68DY1 528 aa14.04□□□□□ -0.16
CCDC40-211ENST00000574099 C10orf99Q6UWK7 81 aa14.04□□□□□ -0.16
CCDC40-211ENST00000574099 RNF144BQ7Z419 303 aa14.04□□□□□ -0.16
CCDC40-211ENST00000574099 ZNF561Q8N587 486 aa14.04□□□□□ -0.16
CCDC40-211ENST00000574099 OR8B12Q8NGG6 310 aa14.04□□□□□ -0.16
CCDC40-211ENST00000574099 OR13D1Q8NGV5 346 aa14.04□□□□□ -0.16
CCDC40-211ENST00000574099 MCUR1Q96AQ8 359 aa14.04□□□□□ -0.16
CCDC40-211ENST00000574099 OTULINQ96BN8 352 aa14.04□□□□□ -0.16
CCDC40-211ENST00000574099 EFCAB1Q9HAE3 211 aa14.04□□□□□ -0.16
CCDC40-211ENST00000574099 TAS2R1Q9NYW7 299 aa14.04□□□□□ -0.16
CCDC40-211ENST00000574099 IL20Q9NYY1 176 aa14.04□□□□□ -0.16
CCDC40-211ENST00000574099 FAM183AA6NL82 134 aa14.03□□□□□ -0.16
CCDC40-211ENST00000574099 C17orf98A8MV24 154 aa14.03□□□□□ -0.16
CCDC40-211ENST00000574099 SOX14O95416 240 aa14.03□□□□□ -0.16
CCDC40-211ENST00000574099 FABP3P05413 133 aa14.03□□□□□ -0.16
CCDC40-211ENST00000574099 CHRM2P08172 466 aa14.03□□□□□ -0.16
CCDC40-211ENST00000574099 PRDX2P32119 198 aa14.03□□□□□ -0.16
CCDC40-211ENST00000574099 DLX6P56179 175 aa14.03□□□□□ -0.16
CCDC40-211ENST00000574099 OR12D2P58182 307 aa14.03□□□□□ -0.16
CCDC40-211ENST00000574099 PSME3P61289 254 aa14.03□□□□□ -0.16
CCDC40-211ENST00000574099 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.03□□□□□ -0.16
CCDC40-211ENST00000574099 LINC00482Q8N8I6 264 aa14.03□□□□□ -0.16
CCDC40-211ENST00000574099 OR4X2Q8NGF9 303 aa14.03□□□□□ -0.16
CCDC40-211ENST00000574099 CHID1Q9BWS9 393 aa14.03□□□□□ -0.16
CCDC40-211ENST00000574099 ARMC1Q9NVT9 282 aa14.03□□□□□ -0.16
CCDC40-211ENST00000574099 OR14J1Q9UGF5 321 aa14.03□□□□□ -0.16
CCDC40-211ENST00000574099 U3KQK5 164 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms