RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 MTCP1P56278 107 aa9.81□□□□□ -0.84
RPAIN-212ENST00000573126 EXT1Q16394 746 aa9.81□□□□□ -0.84
RPAIN-212ENST00000573126 ZNF585AQ6P3V2 769 aa9.81□□□□□ -0.84
RPAIN-212ENST00000573126 YRDCQ86U90 279 aaKnown RBP9.81□□□□□ -0.84
RPAIN-212ENST00000573126 AGBL5Q8NDL9 886 aa9.81□□□□□ -0.84
RPAIN-212ENST00000573126 WNT2BQ93097 391 aa9.81□□□□□ -0.84
RPAIN-212ENST00000573126 SGK3Q96BR1 496 aa9.81□□□□□ -0.84
RPAIN-212ENST00000573126 SCGB3A2Q96PL1 93 aa9.81□□□□□ -0.84
RPAIN-212ENST00000573126 ZNF700Q9H0M5 742 aa9.81□□□□□ -0.84
RPAIN-212ENST00000573126 PIGMQ9H3S5 423 aa9.81□□□□□ -0.84
RPAIN-212ENST00000573126 CRLF2Q9HC73 371 aa9.81□□□□□ -0.84
RPAIN-212ENST00000573126 CYTL1Q9NRR1 136 aa9.81□□□□□ -0.84
RPAIN-212ENST00000573126 GHRLQ9UBU3 117 aa9.81□□□□□ -0.84
RPAIN-212ENST00000573126 FAM230AA0A1W2PPH8 454 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 ATP6V1G2-DDX39BF2Z307 99 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 F8VVB4 439 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 F8VWA3 439 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 GPR31O00270 319 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 SERPINA5P05154 406 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 ALDH3B1P43353 468 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 HGFACQ04756 655 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 TAF9Q16594 264 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 ZNF774Q6NX45 483 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 SLC16A14Q7RTX9 510 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.8□□□□□ -0.84
RPAIN-212ENST00000573126 SEMA6DQ8NFY4 1073 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 STOML3Q8TAV4 291 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 SPTSSAQ969W0 71 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 ZNF2Q9BSG1 426 aaPredicted RBP9.8□□□□□ -0.84
RPAIN-212ENST00000573126 NAA11Q9BSU3 229 aaPredicted RBP9.8□□□□□ -0.84
RPAIN-212ENST00000573126 SLC39A1Q9NY26 324 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 PRELID1Q9Y255 219 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 DNASE2O00115 360 aaPredicted RBP9.8□□□□□ -0.84
RPAIN-212ENST00000573126 MTRF1O75570 445 aaKnown RBP9.8□□□□□ -0.84
RPAIN-212ENST00000573126 ACTL6AO96019 429 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 B4GALT1P15291 398 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 ZNF84P51523 738 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 RRADP55042 308 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 RPS18P62269 152 aaKnown RBP9.8□□□□□ -0.84
RPAIN-212ENST00000573126 RAC1P63000 192 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 SRSF3P84103 164 aaKnown RBP9.8□□□□□ -0.84
RPAIN-212ENST00000573126 PRSS54Q6PEW0 395 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 SLC30A7Q8NEW0 376 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 OR2Y1Q8NGV0 311 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.8□□□□□ -0.84
RPAIN-212ENST00000573126 PCDHGA1Q9Y5H4 931 aa9.8□□□□□ -0.84
RPAIN-212ENST00000573126 PMS2P1A4D2B8 440 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 SGCEO43556 437 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 PTGER4P35408 488 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 HIST1H3AP68431 136 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 HIST2H3PS2Q5TEC6 136 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 BRICD5Q6PL45 260 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 FOXL2NBQ6ZUU3 175 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 HIST2H3AQ71DI3 136 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 CCDC36Q8IYA8 594 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 C20orf196Q8IYI0 205 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 FAAP24Q9BTP7 215 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 ADAT1Q9BUB4 502 aaKnown RBP9.79□□□□□ -0.84
RPAIN-212ENST00000573126 TM2D1Q9BX74 207 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 NKX6-2Q9C056 277 aaPredicted RBP9.79□□□□□ -0.84
RPAIN-212ENST00000573126 AHCTF1Q8WYP5 2266 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 CCDC187A0A096LP49 1063 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 FIGNL2A6NMB9 653 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 TOR1AO14656 332 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 ABCD4O14678 606 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 MSTNO14793 375 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 CBR3O75828 277 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 OPRM1P35372 400 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 ZNF133P52736 654 aaPredicted RBP9.79□□□□□ -0.84
RPAIN-212ENST00000573126 PLEKHN1Q494U1 663 aaPredicted RBP9.79□□□□□ -0.84
RPAIN-212ENST00000573126 FAM27BQ5VT28 67 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 AKR7LQ8NHP1 331 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 DYRK2Q92630 601 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 EMG1Q92979 244 aaKnown RBP9.79□□□□□ -0.84
RPAIN-212ENST00000573126 REEP6Q96HR9 211 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 C2orf50Q96LR7 162 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 Q96M66 194 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 TMEM231Q9H6L2 316 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 SH2D2AQ9NP31 389 aa9.79□□□□□ -0.84
RPAIN-212ENST00000573126 C14orf166Q9Y224 244 aaKnown RBP9.79□□□□□ -0.84
RPAIN-212ENST00000573126 IGKV1-27A0A075B6S5 117 aa9.78□□□□□ -0.84
RPAIN-212ENST00000573126 FGF16O43320 207 aa9.78□□□□□ -0.84
RPAIN-212ENST00000573126 F10P00742 488 aa9.78□□□□□ -0.84
RPAIN-212ENST00000573126 PDGFBP01127 241 aaPredicted RBP9.78□□□□□ -0.84
RPAIN-212ENST00000573126 CSTBP04080 98 aaKnown RBP9.78□□□□□ -0.84
RPAIN-212ENST00000573126 LCATP04180 440 aa9.78□□□□□ -0.84
RPAIN-212ENST00000573126 CYC1P08574 325 aa9.78□□□□□ -0.84
RPAIN-212ENST00000573126 ADCYAP1P18509 176 aa9.78□□□□□ -0.84
RPAIN-212ENST00000573126 MLF1P58340 268 aa9.78□□□□□ -0.84
RPAIN-212ENST00000573126 MRPS34P82930 218 aaKnown RBP9.78□□□□□ -0.84
RPAIN-212ENST00000573126 RPUSD3Q6P087 351 aaKnown RBP9.78□□□□□ -0.84
RPAIN-212ENST00000573126 SULF2Q8IWU5 870 aa9.78□□□□□ -0.84
RPAIN-212ENST00000573126 POC1AQ8NBT0 407 aa9.78□□□□□ -0.84
RPAIN-212ENST00000573126 OR14L1PQ8NHC6 308 aa9.78□□□□□ -0.84
RPAIN-212ENST00000573126 M1APQ8TC57 530 aa9.78□□□□□ -0.84
RPAIN-212ENST00000573126 RNF141Q8WVD5 230 aa9.78□□□□□ -0.84
RPAIN-212ENST00000573126 TSNAXQ99598 290 aaKnown RBP9.78□□□□□ -0.84
RPAIN-212ENST00000573126 SLC6A15Q9H2J7 730 aa9.78□□□□□ -0.84
RPAIN-212ENST00000573126 TMEM218A2RU14 115 aa9.78□□□□□ -0.84
RPAIN-212ENST00000573126 FAM221AA4D161 298 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms