RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 PRDX4Q13162 271 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 MICBQ29980 383 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 AADACL4Q5VUY2 407 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 NXNL2Q5VZ03 156 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 TEX36Q5VZQ5 186 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 C12orf73Q69YU5 71 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 WDR82Q6UXN9 313 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 C12orf54Q6X4T0 127 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 FAM90A1Q86YD7 464 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 ZNF679Q8IYX0 411 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 BCL6BQ8N143 479 aaPredicted RBP6.17□□□□□ -1.42
NUP88-205ENST00000572809 SIGLECL1Q8N7X8 197 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 ZDHHC22Q8N966 263 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 TMEM163Q8TC26 289 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 LRRC29Q8WV35 223 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 OR5P3Q8WZ94 311 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 ITFG2Q969R8 447 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 DACT3Q96B18 629 aaPredicted RBP6.17□□□□□ -1.42
NUP88-205ENST00000572809 UPRTQ96BW1 309 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 CENPNQ96H22 339 aaPredicted RBP6.17□□□□□ -1.42
NUP88-205ENST00000572809 RNF170Q96K19 258 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 TECTBQ96PL2 329 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 OR8B4Q96RC9 309 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 IL4I1Q96RQ9 567 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 MNTQ99583 582 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 RTL8AQ9BWD3 113 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 PAPOLGQ9BWT3 736 aaKnown RBP6.17□□□□□ -1.42
NUP88-205ENST00000572809 PBOV1Q9GZY1 135 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 GABARAPL1Q9H0R8 117 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 ABCB9Q9NP78 766 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 FAM206AQ9NX38 181 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 HAO2Q9NYQ3 351 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 KAAG1Q9UBP8 84 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 CTSZQ9UBR2 303 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 IKZF2Q9UKS7 526 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 COPS3Q9UNS2 423 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 STAB1Q9NY15 2570 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 IGHV3OR15-7A0A075B7D8 119 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 IGHV3OR16-10A0A075B7F0 116 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 TMEM89A2RUT3 159 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 TMEM210A6NLX4 147 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 ZNF670-ZNF695F2Z2N8 137 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 M0R129 80 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 DVL1O14640 695 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 ECDO95905 644 aaPredicted RBP6.16□□□□□ -1.42
NUP88-205ENST00000572809 IGHV4-38-2P0DP08 117 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 ATP6V1B1P15313 513 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 MUC1P15941 1255 aaPredicted RBP6.16□□□□□ -1.42
NUP88-205ENST00000572809 EGR1P18146 543 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 POLR2IP36954 125 aaKnown RBP6.16□□□□□ -1.42
NUP88-205ENST00000572809 MTNR1AP48039 350 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 CXCR4P61073 352 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 FGF12P61328 243 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 ACTG1P63261 375 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 CSNK2BP67870 215 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 RIPPLY1Q0D2K3 151 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 BAMBIQ13145 260 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 ZNF829Q3KNS6 432 aaPredicted RBP6.16□□□□□ -1.42
NUP88-205ENST00000572809 FAM76BQ5HYJ3 339 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 ZNF322Q6U7Q0 402 aaPredicted RBP6.16□□□□□ -1.42
NUP88-205ENST00000572809 CCDC121Q6ZUS5 278 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 KCTD8Q6ZWB6 473 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 ASRGL1Q7L266 308 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 DOK3Q7L591 496 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 KRT74Q7RTS7 529 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 GID4Q8IVV7 300 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 SLC35F2Q8IXU6 374 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 ZDHHC23Q8IYP9 409 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 PNLDC1Q8NA58 520 aaKnown RBP6.16□□□□□ -1.42
NUP88-205ENST00000572809 SCCPDHQ8NBX0 429 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 OR10Z1Q8NGY1 313 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 FAM81AQ8TBF8 368 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 OR51E1Q8TCB6 317 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 RPL3LQ92901 407 aaKnown RBP6.16□□□□□ -1.42
NUP88-205ENST00000572809 GCDHQ92947 438 aaPredicted RBP6.16□□□□□ -1.42
NUP88-205ENST00000572809 CNN2Q99439 309 aaKnown RBP6.16□□□□□ -1.42
NUP88-205ENST00000572809 CCL13Q99616 98 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 CIB1Q99828 191 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 PKP2Q99959 881 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 APOL4Q9BPW4 351 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 OSBPL10Q9BXB5 764 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 TTTY10Q9BZA0 68 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 TLNRD1Q9H1K6 362 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 ADGRL4Q9HBW9 690 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 ESM1Q9NQ30 184 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 CLN6Q9NWW5 311 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 OAZ3Q9UMX2 235 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 DOCK11Q5JSL3 2073 aa6.16□□□□□ -1.42
NUP88-205ENST00000572809 ZNF816-ZNF321PA0A0X1KG74 233 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 SAC3D1A6NKF1 404 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 PRR32B1ATL7 298 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 SRRM5B3KS81 715 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 ZNF879B4DU55 563 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 ZNF732B4DXR9 585 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 LOC110117498-PIK3R3F6TDL0 507 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 MAGEB4O15481 346 aaPredicted RBP6.15□□□□□ -1.42
NUP88-205ENST00000572809 AKR7A2O43488 359 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 NDUFB3O43676 98 aa6.15□□□□□ -1.42
NUP88-205ENST00000572809 MTRF1O75570 445 aaKnown RBP6.15□□□□□ -1.42
NUP88-205ENST00000572809 TOX4O94842 621 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms