RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 KLK2P20151 261 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 NPR2P20594 1047 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 AADACP22760 399 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 EDNRAP25101 427 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 AZGP1P25311 298 aaKnown RBP3.19□□□□□ -1.9
NUP88-202ENST00000570937 YAP1P46937 504 aaKnown RBP3.19□□□□□ -1.9
NUP88-202ENST00000570937 CSNK1A1P48729 337 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 ZNF83P51522 516 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 IST1P53990 364 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 BIDP55957 195 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 GALK2Q01415 458 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 PRKCDQ05655 676 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 CHRNB3Q05901 458 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 RPL18Q07020 188 aaKnown RBP3.19□□□□□ -1.9
NUP88-202ENST00000570937 BSPH1Q075Z2 132 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 TSC22D1Q15714 1073 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 ZSCAN26Q16670 478 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 DEFB113Q30KQ7 82 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 SLC36A2Q495M3 483 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 FGD3Q5JSP0 725 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 THEM4Q5T1C6 240 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 NCMAPQ5T1S8 102 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 C9orf135Q5VTT2 229 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 SHEQ5VZ18 495 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 CARD17Q5XLA6 110 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 RPL13AP3Q6NVV1 102 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 ZNF774Q6NX45 483 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 ZNF544Q6NX49 715 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 SPNS3Q6ZMD2 512 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 WDR88Q6ZMY6 472 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 MBOAT2Q6ZWT7 520 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 VTCN1Q7Z7D3 282 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 NKAIN4Q8IVV8 208 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 PHC2Q8IXK0 858 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 IQCF2Q8IXL9 164 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 NRMQ8IXM6 262 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 LRRC75A-AS1Q8N1F1 130 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 LRRC17Q8N6Y2 441 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 OR4F15Q8NGB8 312 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 OR4D11Q8NGI4 311 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 OR4D10Q8NGI6 311 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 OR1K1Q8NGR3 316 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 OR51A7Q8NH64 312 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 BCL2L2Q92843 193 aaPredicted RBP3.19□□□□□ -1.9
NUP88-202ENST00000570937 ASB9Q96DX5 294 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 ALKBH3Q96Q83 286 aaPredicted RBP3.19□□□□□ -1.9
NUP88-202ENST00000570937 DHRS9Q9BPW9 319 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 PRSS27Q9BQR3 290 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 KATNB1Q9BVA0 655 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 RSPO3Q9BXY4 272 aaPredicted RBP3.19□□□□□ -1.9
NUP88-202ENST00000570937 ULBP2Q9BZM5 246 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 C1orf198Q9H425 327 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 GNB4Q9HAV0 340 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 IL1RAPQ9NPH3 570 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 MEPEQ9NQ76 525 aaPredicted RBP3.19□□□□□ -1.9
NUP88-202ENST00000570937 SLC17A5Q9NRA2 495 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 MED29Q9NX70 200 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 TAS2R5Q9NYW4 299 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 GLTPQ9NZD2 209 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 ACTR3BQ9P1U1 418 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 CTSZQ9UBR2 303 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 SEC14L4Q9UDX3 406 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 CD300AQ9UGN4 299 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 AURKCQ9UQB9 309 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 SLC25A15Q9Y619 301 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 MED12LQ86YW9 2145 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 HEATR5AQ86XA9 2040 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 LRBAP50851 2863 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 INTS1Q8N201 2190 aaKnown RBP3.18□□□□□ -1.9
NUP88-202ENST00000570937 MED12Q93074 2177 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 KIAA1549Q9HCM3 1950 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 FBN2P35556 2912 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 ITPR2Q14571 2701 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 CACNA1CQ13936 2221 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 IGHV4-30-2A0A087WSY4 118 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 A0A087WUU8 490 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 IQCMA0A1B0GVH7 501 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 SH3PXD2BA1X283 911 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 DPRXA6NFQ7 191 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 LRRN3E7EW58 273 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 hCG_2039718K7EN88 272 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 SLC1A7O00341 560 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 GNGT2O14610 69 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 FFAR1O14842 300 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 SURF4O15260 269 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 OR10H3O60404 316 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 NXPH4O95158 308 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 NDUFB2O95178 105 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 THY1P04216 161 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 QDPRP09417 244 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 CCDC159P0C7I6 412 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 PGA4P0DJD7 388 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 PGA3P0DJD8 388 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 CD79AP11912 226 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 CBR1P16152 277 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 GSTM3P21266 225 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 ACVR1BP36896 505 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 AQP2P41181 271 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 FABP6P51161 128 aa3.18□□□□□ -1.9
NUP88-202ENST00000570937 ARHGDIAP52565 204 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms