RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 B3GNT2Q9NY97 397 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 IL36GQ9NZH8 169 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 MYEF2Q9P2K5 600 aaKnown RBP4.68□□□□□ -1.66
SF3B3-213ENST00000569687 ELF5Q9UKW6 265 aaPredicted RBP4.68□□□□□ -1.66
SF3B3-213ENST00000569687 MCTS1Q9ULC4 181 aaKnown RBP4.68□□□□□ -1.66
SF3B3-213ENST00000569687 HSF4Q9ULV5 492 aa4.68□□□□□ -1.66
SF3B3-213ENST00000569687 NOSIPQ9Y314 301 aaKnown RBP4.68□□□□□ -1.66
SF3B3-213ENST00000569687 A0A0B4J2A0 478 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 hCG_38984A0A1B0GV85 526 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 TMEM82A0PJX8 343 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 MEIS3P1A6NDR6 274 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 SERPINE3A8MV23 424 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 MCRIP1C9JLW8 97 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 M0QYG6 137 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 DLL1O00548 723 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 RRP8O43159 456 aaKnown RBP4.67□□□□□ -1.66
SF3B3-213ENST00000569687 XRCC2O43543 280 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 SS18L1O75177 396 aaPredicted RBP4.67□□□□□ -1.66
SF3B3-213ENST00000569687 CRTAPO75718 401 aaPredicted RBP4.67□□□□□ -1.66
SF3B3-213ENST00000569687 MPIG6BO95866 241 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 F10P00742 488 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 CD8AP01732 235 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 IFNA6P05013 189 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 SERPINA5P05154 406 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 FCER2P06734 321 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 OR4E1P0C645 316 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 FCGR2AP12318 317 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 B4GALT1P15291 398 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 MGMTP16455 207 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 GNB3P16520 340 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 FAHP16930 419 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 NFYAP23511 347 aaPredicted RBP4.67□□□□□ -1.66
SF3B3-213ENST00000569687 ZBTB25P24278 435 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 ACKR3P25106 362 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 HOXC12P31275 282 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 ARR3P36575 388 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 MAGEA5P43359 124 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 RBP2P50120 134 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 MEOX1P50221 254 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 TNFSF10P50591 281 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 MTCP1P56278 107 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 GNG2P59768 71 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 PLGLB1Q02325 96 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 HGFACQ04756 655 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 CNN3Q15417 329 aaKnown RBP4.67□□□□□ -1.66
SF3B3-213ENST00000569687 GRK1Q15835 563 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 SLC22A6Q4U2R8 563 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 PABPC1L2AQ5JQF8 200 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 LPCAT3Q6P1A2 487 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 TMEM65Q6PI78 240 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.67□□□□□ -1.66
SF3B3-213ENST00000569687 GALNTL5Q7Z4T8 443 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 LHFPL1Q86WI0 220 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 TUSC5Q8IXB3 177 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 CCDC36Q8IYA8 594 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 ARRDC1Q8N5I2 433 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 C12orf45Q8N5I9 185 aaPredicted RBP4.67□□□□□ -1.66
SF3B3-213ENST00000569687 TMEM178AQ8NBL3 297 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 CPEB3Q8NE35 698 aaKnown RBP4.67□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF680Q8NEM1 530 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 TMEM185AQ8NFB2 350 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 OR4S1Q8NGB4 309 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 OR51T1Q8NGJ9 327 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 OR4K15Q8NH41 348 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 AKR7LQ8NHP1 331 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 ABHD3Q8WU67 409 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 MITD1Q8WV92 249 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 TNFAIP8L1Q8WVP5 186 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 NANOS1Q8WY41 292 aaKnown RBP4.67□□□□□ -1.66
SF3B3-213ENST00000569687 FBXW5Q969U6 566 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 MRGPRFQ96AM1 343 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 DACT3Q96B18 629 aaPredicted RBP4.67□□□□□ -1.66
SF3B3-213ENST00000569687 C1orf159Q96HA4 380 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 WDYHV1Q96HA8 205 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 BOD1Q96IK1 185 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 SPACA5Q96QH8 159 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 GPER1Q99527 375 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 NICN1Q9BSH3 213 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 PECRQ9BY49 303 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 HES7Q9BYE0 225 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 METTL9Q9H1A3 318 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 POFUT1Q9H488 388 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF552Q9H707 407 aaPredicted RBP4.67□□□□□ -1.66
SF3B3-213ENST00000569687 ZDHHC11Q9H8X9 412 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 ZMAT3Q9HA38 289 aaKnown RBP4.67□□□□□ -1.66
SF3B3-213ENST00000569687 ASCL3Q9NQ33 180 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 GLRX2Q9NS18 164 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF69Q9UC07 566 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 SLC23A1Q9UHI7 598 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 SHPKQ9UHJ6 478 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 GPR132Q9UNW8 380 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF175Q9Y473 711 aa4.67□□□□□ -1.66
SF3B3-213ENST00000569687 NCOA6Q14686 2063 aaPredicted RBP4.67□□□□□ -1.66
SF3B3-213ENST00000569687 PHF3Q92576 2039 aaKnown RBP4.67□□□□□ -1.66
SF3B3-213ENST00000569687 KNTC1P50748 2209 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 ASPMQ8IZT6 3477 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 PCNX2A6NKB5 2137 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF292O60281 2723 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 LOC100509620A0A075B734 347 aa4.66□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF816-ZNF321PA0A0X1KG74 233 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms