RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 A0A1B0GVI7 797 aa9.15□□□□□ -0.94
CDH3-208ENST00000569036 MEGF11A6BM72 1044 aa9.15□□□□□ -0.94
CDH3-208ENST00000569036 IFNL4K9M1U5 179 aa9.15□□□□□ -0.94
CDH3-208ENST00000569036 LHBP01229 141 aa9.15□□□□□ -0.94
CDH3-208ENST00000569036 SLC2A2P11168 524 aaPredicted RBP9.15□□□□□ -0.94
CDH3-208ENST00000569036 SNRPBP14678 240 aaKnown RBP9.15□□□□□ -0.94
CDH3-208ENST00000569036 TAGLNQ01995 201 aaKnown RBP9.15□□□□□ -0.94
CDH3-208ENST00000569036 PLP2Q04941 152 aa9.15□□□□□ -0.94
CDH3-208ENST00000569036 HABP2Q14520 560 aaPredicted RBP9.15□□□□□ -0.94
CDH3-208ENST00000569036 SEC23BQ15437 767 aa9.15□□□□□ -0.94
CDH3-208ENST00000569036 LY6EQ16553 131 aa9.15□□□□□ -0.94
CDH3-208ENST00000569036 TATDN3Q17R31 274 aa9.15□□□□□ -0.94
CDH3-208ENST00000569036 FAM201AQ5SY85 155 aa9.15□□□□□ -0.94
CDH3-208ENST00000569036 CD276Q5ZPR3 534 aa9.15□□□□□ -0.94
CDH3-208ENST00000569036 REEP3Q6NUK4 255 aa9.15□□□□□ -0.94
CDH3-208ENST00000569036 C6orf120Q7Z4R8 191 aa9.15□□□□□ -0.94
CDH3-208ENST00000569036 UEVLDQ8IX04 471 aa9.15□□□□□ -0.94
CDH3-208ENST00000569036 PNLDC1Q8NA58 520 aaKnown RBP9.15□□□□□ -0.94
CDH3-208ENST00000569036 DEDD2Q8WXF8 326 aa9.15□□□□□ -0.94
CDH3-208ENST00000569036 DDB2Q92466 427 aa9.15□□□□□ -0.94
CDH3-208ENST00000569036 NSMAFQ92636 917 aa9.15□□□□□ -0.94
CDH3-208ENST00000569036 UFD1Q92890 307 aa9.15□□□□□ -0.94
CDH3-208ENST00000569036 NEDD4LQ96PU5 975 aa9.15□□□□□ -0.94
CDH3-208ENST00000569036 C7orf50Q9BRJ6 194 aaKnown RBP9.15□□□□□ -0.94
CDH3-208ENST00000569036 MIXL1Q9H2W2 232 aa9.15□□□□□ -0.94
CDH3-208ENST00000569036 NMNAT1Q9HAN9 279 aaPredicted RBP9.15□□□□□ -0.94
CDH3-208ENST00000569036 TMEM38BQ9NVV0 291 aa9.15□□□□□ -0.94
CDH3-208ENST00000569036 NUFIP1Q9UHK0 495 aaKnown RBP9.15□□□□□ -0.94
CDH3-208ENST00000569036 ING4Q9UNL4 249 aa9.15□□□□□ -0.94
CDH3-208ENST00000569036 LOC105371267A0A1B0GV96 52 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 FAM240BA0A1B0GVZ2 78 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 A0A1W2PQL4 384 aaPredicted RBP9.14□□□□□ -0.95
CDH3-208ENST00000569036 LYRM1O43325 122 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 TMEM127O75204 238 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 ENTPD6O75354 484 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 CDRT1O95170 752 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 FARS2O95363 451 aaKnown RBP9.14□□□□□ -0.95
CDH3-208ENST00000569036 FSTL3O95633 263 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 PAHP00439 452 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 GKN3PP0CG01 181 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 FAHP16930 419 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 IFNGR2P38484 337 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 PSMB10P40306 273 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 CSNK1A1P48729 337 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 NPY4RP50391 375 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 PPP1CBP62140 327 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 ARF6P62330 175 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 EGR4Q05215 589 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 TRAM1Q15629 374 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 SLC36A2Q495M3 483 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 KLHL12Q53G59 568 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 PYDC2Q56P42 97 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 MRPL2Q5T653 305 aaKnown RBP9.14□□□□□ -0.95
CDH3-208ENST00000569036 WBP2NLQ6ICG8 309 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 CRIP3Q6Q6R5 217 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 BAIAP2L2Q6UXY1 529 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 NHLRC1Q6VVB1 395 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 WDR88Q6ZMY6 472 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 VMO1Q7Z5L0 202 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 DPPA2Q7Z7J5 298 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 IQCF2Q8IXL9 164 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 CLECL1Q8IZS7 167 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 YIPF7Q8N8F6 280 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 OR4K5Q8NGD3 323 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 NPRL2Q8WTW4 380 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 XAGE5Q8WWM1 108 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 DMRTB1Q96MA1 342 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 SLC35A5Q9BS91 424 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 TMEM43Q9BTV4 400 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 SPATA5L1Q9BVQ7 753 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 TSSK6Q9BXA6 273 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 TEX12Q9BXU0 123 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 NPFFR1Q9GZQ6 430 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 PPP1R3EQ9H7J1 279 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 ZNF702PQ9H963 129 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 ABCB9Q9NP78 766 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 SNTG1Q9NSN8 517 aa9.14□□□□□ -0.95
CDH3-208ENST00000569036 EIF3KQ9UBQ5 218 aaKnown RBP9.14□□□□□ -0.95
CDH3-208ENST00000569036 A0A1W2PRQ8 180 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 C7orf66A4D0T2 115 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 MS4A18H0YCH9 400 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 SURF4O15260 269 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 PLA2G10O15496 165 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 PRODHO43272 600 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 DHFRP00374 187 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 HLA-DPB1P04440 258 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 H1F0P07305 194 aaKnown RBP9.13□□□□□ -0.95
CDH3-208ENST00000569036 MMP7P09237 267 aaPredicted RBP9.13□□□□□ -0.95
CDH3-208ENST00000569036 ARSBP15848 533 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 GRPRP30550 384 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 ACAA2P42765 397 aaKnown RBP9.13□□□□□ -0.95
CDH3-208ENST00000569036 INPP1P49441 399 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 ANXA11P50995 505 aaKnown RBP9.13□□□□□ -0.95
CDH3-208ENST00000569036 DSTNP60981 165 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 HBA1P69905 142 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 DGCR2P98153 550 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 PSG7Q13046 419 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 GNA13Q14344 377 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 MS4A18Q3C1V0 323 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 H1FNTQ75WM6 255 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms