RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 RDH14Q9HBH5 336 aa0.37□□□□□ -2.35
CDH1-211ENST00000567320 HEBP1Q9NRV9 189 aa0.37□□□□□ -2.35
CDH1-211ENST00000567320 CLN6Q9NWW5 311 aa0.37□□□□□ -2.35
CDH1-211ENST00000567320 NDRG2Q9UN36 371 aaKnown RBP0.37□□□□□ -2.35
CDH1-211ENST00000567320 PPIL1Q9Y3C6 166 aa0.37□□□□□ -2.35
CDH1-211ENST00000567320 U3KQK5 164 aa0.37□□□□□ -2.35
CDH1-211ENST00000567320 MROH7Q68CQ1 1323 aa0.37□□□□□ -2.35
CDH1-211ENST00000567320 H3BRN7 92 aa0.36□□□□□ -2.35
CDH1-211ENST00000567320 ISLRO14498 428 aa0.36□□□□□ -2.35
CDH1-211ENST00000567320 CD160O95971 181 aa0.36□□□□□ -2.35
CDH1-211ENST00000567320 GZMAP12544 262 aa0.36□□□□□ -2.35
CDH1-211ENST00000567320 CXCR1P25024 350 aa0.36□□□□□ -2.35
CDH1-211ENST00000567320 TEAD1P28347 426 aa0.36□□□□□ -2.35
CDH1-211ENST00000567320 CRABP2P29373 138 aa0.36□□□□□ -2.35
CDH1-211ENST00000567320 COILP38432 576 aaPredicted RBP0.36□□□□□ -2.35
CDH1-211ENST00000567320 UBE2MP61081 183 aaKnown RBP0.36□□□□□ -2.35
CDH1-211ENST00000567320 ST3GAL4Q11206 333 aa0.36□□□□□ -2.35
CDH1-211ENST00000567320 MERTKQ12866 999 aa0.36□□□□□ -2.35
CDH1-211ENST00000567320 HADHQ16836 314 aaKnown RBP0.36□□□□□ -2.35
CDH1-211ENST00000567320 CENPPQ6IPU0 288 aa0.36□□□□□ -2.35
CDH1-211ENST00000567320 CYHR1Q6ZMK1 362 aa0.36□□□□□ -2.35
CDH1-211ENST00000567320 Q6ZRU5 148 aa0.36□□□□□ -2.35
CDH1-211ENST00000567320 SLC30A8Q8IWU4 369 aa0.36□□□□□ -2.35
CDH1-211ENST00000567320 AMN1Q8IY45 258 aa0.36□□□□□ -2.35
CDH1-211ENST00000567320 ELMO1Q92556 727 aa0.36□□□□□ -2.35
CDH1-211ENST00000567320 MRPL32Q9BYC8 188 aaKnown RBP0.36□□□□□ -2.35
CDH1-211ENST00000567320 UCK2Q9BZX2 261 aa0.36□□□□□ -2.35
CDH1-211ENST00000567320 GABARAPL1Q9H0R8 117 aa0.36□□□□□ -2.35
CDH1-211ENST00000567320 TMEM165Q9HC07 324 aa0.36□□□□□ -2.35
CDH1-211ENST00000567320 ABCB9Q9NP78 766 aa0.36□□□□□ -2.35
CDH1-211ENST00000567320 SLC7A11Q9UPY5 501 aa0.36□□□□□ -2.35
CDH1-211ENST00000567320 ZNF257Q9Y2Q1 563 aa0.36□□□□□ -2.35
CDH1-211ENST00000567320 A8MWP4 228 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 CXCL11O14625 94 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 RGS5O15539 181 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 HUS1O60921 280 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 CTNSO60931 367 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 PSIP1O75475 530 aaKnown RBP0.35□□□□□ -2.35
CDH1-211ENST00000567320 OXTP01178 125 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 CLTAP09496 248 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 MYL2P10916 166 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 GTF2E2P29084 291 aaKnown RBP0.35□□□□□ -2.35
CDH1-211ENST00000567320 TAGLN2P37802 199 aaKnown RBP0.35□□□□□ -2.35
CDH1-211ENST00000567320 KDSRQ06136 332 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 ZNF33AQ06730 810 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 TAF7Q15545 349 aaPredicted RBP0.35□□□□□ -2.35
CDH1-211ENST00000567320 TRMT5Q32P41 509 aaKnown RBP0.35□□□□□ -2.35
CDH1-211ENST00000567320 STEAP4Q687X5 459 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 SLC25A25Q6KCM7 469 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 NOXRED1Q6NXP6 359 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 CASC1Q6TDU7 716 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 Q6ZRN7 208 aaPredicted RBP0.35□□□□□ -2.35
CDH1-211ENST00000567320 RGS9BPQ6ZS82 235 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 ZNF767PQ75MW2 155 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 HS3ST5Q8IZT8 346 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 VKORC1L1Q8N0U8 176 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 ZCCHC24Q8N2G6 241 aaKnown RBP0.35□□□□□ -2.35
CDH1-211ENST00000567320 WDR31Q8NA23 367 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 TTC29Q8NA56 475 aaPredicted RBP0.35□□□□□ -2.35
CDH1-211ENST00000567320 OR1S1Q8NH92 325 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 OR2V1Q8NHB1 315 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 ASZ1Q8WWH4 475 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 FBXO32Q969P5 355 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 RNF170Q96K19 258 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 ZYG11BQ9C0D3 744 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 TXNIPQ9H3M7 391 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 FANCEQ9HB96 536 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 BLOC1S6Q9UL45 172 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 CCL26Q9Y258 94 aa0.35□□□□□ -2.35
CDH1-211ENST00000567320 RCL1Q9Y2P8 373 aaKnown RBP0.35□□□□□ -2.35
CDH1-211ENST00000567320 TSPAN11A1L157 253 aa0.34□□□□□ -2.36
CDH1-211ENST00000567320 HEATR9A2RTY3 570 aa0.34□□□□□ -2.36
CDH1-211ENST00000567320 A6NED7 52 aa0.34□□□□□ -2.36
CDH1-211ENST00000567320 H3BMM0 161 aa0.34□□□□□ -2.36
CDH1-211ENST00000567320 K7ERS5 55 aa0.34□□□□□ -2.36
CDH1-211ENST00000567320 MYL12BO14950 172 aa0.34□□□□□ -2.36
CDH1-211ENST00000567320 RNF13O43567 381 aa0.34□□□□□ -2.36
CDH1-211ENST00000567320 CCNB2O95067 398 aa0.34□□□□□ -2.36
CDH1-211ENST00000567320 RAB5AP20339 215 aa0.34□□□□□ -2.36
CDH1-211ENST00000567320 SSX2Q16385 188 aa0.34□□□□□ -2.36
CDH1-211ENST00000567320 PRAMEF20Q5VT98 475 aa0.34□□□□□ -2.36
CDH1-211ENST00000567320 SPESP1Q6UW49 350 aa0.34□□□□□ -2.36
CDH1-211ENST00000567320 FAM228AQ86W67 206 aa0.34□□□□□ -2.36
CDH1-211ENST00000567320 ZFP82Q8N141 532 aa0.34□□□□□ -2.36
CDH1-211ENST00000567320 C3orf22Q8N5N4 141 aa0.34□□□□□ -2.36
CDH1-211ENST00000567320 OR5H2Q8NGV7 314 aa0.34□□□□□ -2.36
CDH1-211ENST00000567320 APOBEC3DQ96AK3 386 aaPredicted RBP0.34□□□□□ -2.36
CDH1-211ENST00000567320 UBE2WQ96B02 151 aa0.34□□□□□ -2.36
CDH1-211ENST00000567320 FAM19A4Q96LR4 140 aa0.34□□□□□ -2.36
CDH1-211ENST00000567320 Q96MT0 163 aa0.34□□□□□ -2.36
CDH1-211ENST00000567320 XPO6Q96QU8 1125 aaKnown RBP0.34□□□□□ -2.36
CDH1-211ENST00000567320 NAPGQ99747 312 aaPredicted RBP0.34□□□□□ -2.36
CDH1-211ENST00000567320 CALN1Q9BXU9 219 aa0.34□□□□□ -2.36
CDH1-211ENST00000567320 NAGKQ9UJ70 344 aa0.34□□□□□ -2.36
CDH1-211ENST00000567320 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP0.33□□□□□ -2.36
CDH1-211ENST00000567320 IGKV1D-37A0A075B6S9 117 aa0.33□□□□□ -2.36
CDH1-211ENST00000567320 KNCNA6PVL3 124 aa0.33□□□□□ -2.36
CDH1-211ENST00000567320 PTHP01270 115 aa0.33□□□□□ -2.36
CDH1-211ENST00000567320 PTHLHP12272 177 aa0.33□□□□□ -2.36
CDH1-211ENST00000567320 HLA-GP17693 338 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms