RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 OSBPL10Q9BXB5 764 aa11.7□□□□□ -0.54
COMMD4-216ENST00000567023 PRRG3Q9BZD7 231 aa11.7□□□□□ -0.54
COMMD4-216ENST00000567023 SEMA6AQ9H2E6 1030 aa11.7□□□□□ -0.54
COMMD4-216ENST00000567023 DPAGT1Q9H3H5 408 aa11.7□□□□□ -0.54
COMMD4-216ENST00000567023 KRT84Q9NSB2 600 aa11.7□□□□□ -0.54
COMMD4-216ENST00000567023 ONECUT1Q9UBC0 465 aa11.7□□□□□ -0.54
COMMD4-216ENST00000567023 SLC25A10Q9UBX3 287 aaPredicted RBP11.7□□□□□ -0.54
COMMD4-216ENST00000567023 NUFIP1Q9UHK0 495 aaKnown RBP11.7□□□□□ -0.54
COMMD4-216ENST00000567023 OAZ3Q9UMX2 235 aa11.7□□□□□ -0.54
COMMD4-216ENST00000567023 COPS3Q9UNS2 423 aa11.7□□□□□ -0.54
COMMD4-216ENST00000567023 IGKV1D-17A0A075B6S4 117 aa11.69□□□□□ -0.54
COMMD4-216ENST00000567023 CLPSL1A2RUU4 121 aa11.69□□□□□ -0.54
COMMD4-216ENST00000567023 NKX6-3A6NJ46 265 aa11.69□□□□□ -0.54
COMMD4-216ENST00000567023 ZNF732B4DXR9 585 aa11.69□□□□□ -0.54
COMMD4-216ENST00000567023 RNASEK-C17orf49H0YIS7 233 aa11.69□□□□□ -0.54
COMMD4-216ENST00000567023 M0R1W7 72 aa11.69□□□□□ -0.54
COMMD4-216ENST00000567023 MITFO75030 526 aaPredicted RBP11.69□□□□□ -0.54
COMMD4-216ENST00000567023 SRSF10O75494 262 aaKnown RBP11.69□□□□□ -0.54
COMMD4-216ENST00000567023 IGHV4-59P01825 116 aa11.69□□□□□ -0.54
COMMD4-216ENST00000567023 MRPL3P09001 348 aaKnown RBP11.69□□□□□ -0.54
COMMD4-216ENST00000567023 GLRA1P23415 457 aa11.69□□□□□ -0.54
COMMD4-216ENST00000567023 RIDAP52758 137 aaKnown RBP11.69□□□□□ -0.54
COMMD4-216ENST00000567023 ZNF829Q3KNS6 432 aaPredicted RBP11.69□□□□□ -0.54
COMMD4-216ENST00000567023 CEP78Q5JTW2 689 aa11.69□□□□□ -0.54
COMMD4-216ENST00000567023 AADACL4Q5VUY2 407 aa11.69□□□□□ -0.54
COMMD4-216ENST00000567023 NXNL2Q5VZ03 156 aa11.69□□□□□ -0.54
COMMD4-216ENST00000567023 TREML4Q6UXN2 200 aa11.69□□□□□ -0.54
COMMD4-216ENST00000567023 MEPCEQ7L2J0 689 aaKnown RBP11.69□□□□□ -0.54
COMMD4-216ENST00000567023 PDZD9Q8IXQ8 264 aa11.69□□□□□ -0.54
COMMD4-216ENST00000567023 OR51E1Q8TCB6 317 aa11.69□□□□□ -0.54
COMMD4-216ENST00000567023 AQP3Q92482 292 aa11.69□□□□□ -0.54
COMMD4-216ENST00000567023 GPR84Q9NQS5 396 aa11.69□□□□□ -0.54
COMMD4-216ENST00000567023 RASL12Q9NYN1 266 aa11.69□□□□□ -0.54
COMMD4-216ENST00000567023 ZNF222Q9UK12 451 aa11.69□□□□□ -0.54
COMMD4-216ENST00000567023 CAB39Q9Y376 341 aaPredicted RBP11.69□□□□□ -0.54
COMMD4-216ENST00000567023 FAM96BQ9Y3D0 163 aa11.69□□□□□ -0.54
COMMD4-216ENST00000567023 MAB21L2Q9Y586 359 aa11.69□□□□□ -0.54
COMMD4-216ENST00000567023 SLC22A31A6NKX4 558 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 ZAR1LA6NP61 321 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 WIPF1O43516 503 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 GPR137BO60478 399 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 MTRF1O75570 445 aaKnown RBP11.68□□□□□ -0.54
COMMD4-216ENST00000567023 DHRS3O75911 302 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 TTRP02766 147 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 FBP1P09467 338 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 PSG2P11465 335 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 EPHA2P29317 976 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 UBE2E1P51965 193 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 GMFBP60983 142 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 ACSM1Q08AH1 577 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 SLX4IPQ5VYV7 408 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 TMEM42Q69YG0 159 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 Q6ZSR3 168 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 THAP5Q7Z6K1 395 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 H1FXQ92522 213 aaKnown RBP11.68□□□□□ -0.54
COMMD4-216ENST00000567023 PPP1R14AQ96A00 147 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 SDSLQ96GA7 329 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 CNN2Q99439 309 aaKnown RBP11.68□□□□□ -0.54
COMMD4-216ENST00000567023 CIB1Q99828 191 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 CITED1Q99966 193 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 METTL8Q9H825 291 aaKnown RBP11.68□□□□□ -0.54
COMMD4-216ENST00000567023 MOB1AQ9H8S9 216 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 S100A14Q9HCY8 104 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 SIRT7Q9NRC8 400 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 ZNRD1Q9P1U0 126 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 ENOPH1Q9UHY7 261 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 ENPP5Q9UJA9 477 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 PIGLQ9Y2B2 252 aa11.68□□□□□ -0.54
COMMD4-216ENST00000567023 TRBV23-1A0A0A0MS06 115 aa11.67□□□□□ -0.54
COMMD4-216ENST00000567023 SAC3D1A6NKF1 404 aa11.67□□□□□ -0.54
COMMD4-216ENST00000567023 DHRS7CA6NNS2 312 aa11.67□□□□□ -0.54
COMMD4-216ENST00000567023 NPFFO15130 113 aa11.67□□□□□ -0.54
COMMD4-216ENST00000567023 NRASP01111 189 aa11.67□□□□□ -0.54
COMMD4-216ENST00000567023 TFF1P04155 84 aa11.67□□□□□ -0.54
COMMD4-216ENST00000567023 FAHP16930 419 aa11.67□□□□□ -0.54
COMMD4-216ENST00000567023 EEF1B2P24534 225 aaKnown RBP11.67□□□□□ -0.54
COMMD4-216ENST00000567023 CXCR4P61073 352 aa11.67□□□□□ -0.54
COMMD4-216ENST00000567023 EGR3Q06889 387 aa11.67□□□□□ -0.54
COMMD4-216ENST00000567023 MFGE8Q08431 387 aaPredicted RBP11.67□□□□□ -0.54
COMMD4-216ENST00000567023 NCR3LG1Q68D85 454 aa11.67□□□□□ -0.54
COMMD4-216ENST00000567023 C12orf73Q69YU5 71 aa11.67□□□□□ -0.54
COMMD4-216ENST00000567023 HAGHLQ6PII5 290 aaPredicted RBP11.67□□□□□ -0.54
COMMD4-216ENST00000567023 ZNF322Q6U7Q0 402 aaPredicted RBP11.67□□□□□ -0.54
COMMD4-216ENST00000567023 GDPGP1Q6ZNW5 385 aa11.67□□□□□ -0.54
COMMD4-216ENST00000567023 C17orf107Q6ZR85 190 aa11.67□□□□□ -0.54
COMMD4-216ENST00000567023 MOB3CQ70IA8 216 aa11.67□□□□□ -0.54
COMMD4-216ENST00000567023 BCDIN3DQ7Z5W3 292 aaKnown RBP11.67□□□□□ -0.54
COMMD4-216ENST00000567023 COMMD2Q86X83 199 aa11.67□□□□□ -0.54
COMMD4-216ENST00000567023 ELMOD2Q8IZ81 293 aa11.67□□□□□ -0.54
COMMD4-216ENST00000567023 TCEANCQ8N8B7 351 aa11.67□□□□□ -0.54
COMMD4-216ENST00000567023 ZSCAN4Q8NAM6 433 aaPredicted RBP11.67□□□□□ -0.54
COMMD4-216ENST00000567023 ZNRF1Q8ND25 227 aa11.67□□□□□ -0.54
COMMD4-216ENST00000567023 LINC01006Q8NI28 216 aa11.67□□□□□ -0.54
COMMD4-216ENST00000567023 TMEM163Q8TC26 289 aa11.67□□□□□ -0.54
COMMD4-216ENST00000567023 RBM4BQ9BQ04 359 aaKnown RBP11.67□□□□□ -0.54
COMMD4-216ENST00000567023 GABARAPL3Q9BY60 117 aa11.67□□□□□ -0.54
COMMD4-216ENST00000567023 ADGRL4Q9HBW9 690 aa11.67□□□□□ -0.54
COMMD4-216ENST00000567023 CLN6Q9NWW5 311 aa11.67□□□□□ -0.54
COMMD4-216ENST00000567023 H2AFY2Q9P0M6 372 aaPredicted RBP11.67□□□□□ -0.54
COMMD4-216ENST00000567023 V9GYS6 101 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms