RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 CYP24A1Q07973 514 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 OR1Q1Q15612 314 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 C18orf21Q32NC0 220 aaPredicted RBP3.22□□□□□ -1.89
CNOT1-209ENST00000566240 FAM78AQ5JUQ0 283 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 NTM-AS1Q6ZSK4 140 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 CALHM1Q8IU99 346 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 CDKL3Q8IVW4 592 aaPredicted RBP3.22□□□□□ -1.89
CNOT1-209ENST00000566240 C19orf18Q8NEA5 215 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 TMEM234Q8WY98 164 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 RERGQ96A58 199 aaPredicted RBP3.22□□□□□ -1.89
CNOT1-209ENST00000566240 RDH12Q96NR8 316 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 TSNAXQ99598 290 aaKnown RBP3.22□□□□□ -1.89
CNOT1-209ENST00000566240 UTP23Q9BRU9 249 aaKnown RBP3.22□□□□□ -1.89
CNOT1-209ENST00000566240 API5Q9BZZ5 524 aaKnown RBP3.22□□□□□ -1.89
CNOT1-209ENST00000566240 TOLLIPQ9H0E2 274 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 CSNK1G1Q9HCP0 422 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 ZNF229Q9UJW7 825 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 KLF12Q9Y4X4 402 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 NFAT5O94916 1531 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 LAMB4A4D0S4 1761 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 KDM3BQ7LBC6 1761 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 MAP3K5Q99683 1374 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 BRCA1P38398 1863 aaKnown RBP3.22□□□□□ -1.89
CNOT1-209ENST00000566240 PXDNLA1KZ92 1463 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 ABCA3Q99758 1704 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 AK9Q5TCS8 1911 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 TNS3Q68CZ2 1445 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 RGPD5Q99666 1765 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 A0A0A6YYD5 115 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 SEC14L6B5MCN3 397 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 KRBOX1C9JBD0 128 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 K7ERQ8 282 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 TNFRSF11BO00300 401 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 TTC4O95801 387 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 BGNP21810 368 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 GNRHRP30968 328 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 LCN1P31025 176 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 ARR3P36575 388 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 CDK5Q00535 292 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 LOXL1Q08397 574 aaPredicted RBP3.21□□□□□ -1.9
CNOT1-209ENST00000566240 C2orf54Q08AI8 447 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 IFFO1Q0D2I5 559 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 KRT71Q3SY84 523 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 SMUG1Q53HV7 270 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 APOBEC3HQ6NTF7 200 aaKnown RBP3.21□□□□□ -1.9
CNOT1-209ENST00000566240 RTL4Q6ZR62 310 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 Q6ZVH6 145 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 SH2D6Q7Z4S9 175 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 KRTAP11-1Q8IUC1 163 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 RIMKLAQ8IXN7 391 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 TCAIMQ8N3R3 496 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 CYB561D1Q8N8Q1 229 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 OR6N1Q8NGY5 312 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 RXFP2Q8WXD0 754 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 FLYWCH2Q96CP2 140 aaKnown RBP3.21□□□□□ -1.9
CNOT1-209ENST00000566240 FAM19A4Q96LR4 140 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 ZNF382Q96SR6 550 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 NAPGQ99747 312 aaPredicted RBP3.21□□□□□ -1.9
CNOT1-209ENST00000566240 ARV1Q9H2C2 271 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 OR51B5Q9H339 312 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 OR52D1Q9H346 318 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 ZNRD1Q9P1U0 126 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 CFAP45Q9UL16 551 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 HES2Q9Y543 173 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 KIAA0232Q92628 1395 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 C1orf167Q5SNV9 1468 aa3.21□□□□□ -1.9
CNOT1-209ENST00000566240 MAP3K19Q56UN5 1328 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 RGPD2P0DJD1 1756 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 SCN11AQ9UI33 1791 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 SSH2Q76I76 1423 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 NHSL1Q5SYE7 1610 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 PKD1L3Q7Z443 1732 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 CRYBG1Q9Y4K1 1723 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 IGKV1-27A0A075B6S5 117 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 IGHV1OR15-9A0A0B4J2B8 117 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 NDUFC2-KCTD14E9PQ53 114 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 TAAR5O14804 337 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 RRP8O43159 456 aaKnown RBP3.2□□□□□ -1.9
CNOT1-209ENST00000566240 B4GALT5O43286 388 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 GATCO43716 136 aaKnown RBP3.2□□□□□ -1.9
CNOT1-209ENST00000566240 ALOX12BO75342 701 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 UPK1BO75841 260 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 SC5DO75845 299 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 APCSP02743 223 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 RPS9P46781 194 aaKnown RBP3.2□□□□□ -1.9
CNOT1-209ENST00000566240 SLC35A1P78382 337 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 SYCNQ0VAF6 134 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 GPR176Q14439 515 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 TAL2Q16559 108 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 MPV17L2Q567V2 206 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 WDFY1Q8IWB7 410 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 Q8N9L7 120 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 LILRB4Q8NHJ6 448 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 RXFP4Q8TDU9 374 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 CDKL2Q92772 493 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 CYYR1Q96J86 154 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 ZNF488Q96MN9 340 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 SULT4A1Q9BR01 284 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 NDFIP1Q9BT67 221 aa3.2□□□□□ -1.9
CNOT1-209ENST00000566240 SLC38A10Q9HBR0 1119 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms