RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 EXTL2Q9UBQ6 330 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 CABIN1Q9Y6J0 2220 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 TNFSF12O43508 249 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 AKR7A3O95154 331 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 SOD3P08294 240 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 PGA4P0DJD7 388 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 PGA5P0DJD9 388 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 TCN2P20062 427 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 CCNOP22674 350 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 LSM6P62312 80 aaKnown RBP2.99□□□□□ -1.93
CHD9-213ENST00000564845 IFITM2Q01629 132 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 TSPAN31Q12999 210 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 GUK1Q16774 197 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 Q5PR19 223 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 ZNF468Q5VIY5 522 aaPredicted RBP2.99□□□□□ -1.93
CHD9-213ENST00000564845 PWWP2BQ6NUJ5 590 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 MBOAT2Q6ZWT7 520 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 OR6V1Q8N148 313 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 OR13C3Q8NGS6 347 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 LGALS12Q96DT0 336 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 TMEM59Q9BXS4 323 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 G6PC2Q9NQR9 355 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.99□□□□□ -1.93
CHD9-213ENST00000564845 DECR2Q9NUI1 292 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 OR6C3Q9NZP0 311 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 KLHDC2Q9Y2U9 406 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 TMED3Q9Y3Q3 217 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 CUL9Q8IWT3 2517 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 ZNF878C9JN71 531 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 H0Y8G0 127 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 EDNRAP25101 427 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 FASLGP48023 281 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 TOMM20LQ6UXN7 152 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 TMPRSS7Q7RTY8 843 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 OR2W3Q7Z3T1 314 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 NR2C2APQ86WQ0 139 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 CALHM3Q86XJ0 350 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 OR5AP2Q8NGF4 316 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 TMEM163Q8TC26 289 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 ATG5Q9H1Y0 275 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 PLA2G3Q9NZ20 509 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 DAPP1Q9UN19 280 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 TRAV6A0A075B6T7 132 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 ZNF816-ZNF321PA0A0X1KG74 233 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 FAM25EA8MYX2 175 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 TRAPPC2LH3BP13 241 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 HSPB6O14558 160 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 FOXS1O43638 330 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 SRMP19623 302 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 AADACP22760 399 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 CD27P26842 260 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 SSR4P51571 173 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 CLDN15P56746 228 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 NFATC4Q14934 902 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 IAH1Q2TAA2 248 aaPredicted RBP2.99□□□□□ -1.93
CHD9-213ENST00000564845 JAGN1Q8N5M9 183 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 OR10J5Q8NHC4 309 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 FLVCR1-AS1Q8TAF5 88 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 APOBEC3DQ96AK3 386 aaPredicted RBP2.99□□□□□ -1.93
CHD9-213ENST00000564845 KTI12Q96EK9 354 aaPredicted RBP2.99□□□□□ -1.93
CHD9-213ENST00000564845 C4orf36Q96KX1 117 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 SDF2Q99470 211 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 FLVCR2Q9UPI3 526 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 HEATR5BQ9P2D3 2071 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 HELTA6NFD8 242 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 IL2RAP01589 272 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 GPX2P18283 190 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 CD1CP29017 333 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 PCBP4P57723 403 aaKnown RBP2.99□□□□□ -1.93
CHD9-213ENST00000564845 PJVKQ0ZLH3 352 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 SLC25A30Q5SVS4 291 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 SLC48A1Q6P1K1 146 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 SLC23A3Q6PIS1 610 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 KIRREL2Q6UWL6 708 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 CBLN2Q8IUK8 224 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 ZNF695Q8IW36 515 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 ZNF615Q8N8J6 731 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 OR1L4Q8NGR5 311 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 C16orf52Q8NHV5 167 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 FAM131CQ96AQ9 280 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 WDR34Q96EX3 536 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 DERL3Q96Q80 235 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 ANXA10Q9UJ72 324 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 A0A1W2PS18 150 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 SIGLEC6O43699 453 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 PDE6DO43924 150 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 OR2A4O95047 310 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 NXPH3O95157 252 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 ZGLP1P0C6A0 271 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 DUSP1P28562 367 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 POU3F4P49335 361 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 PRRX1P54821 245 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 SPCS3P61009 180 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 PAX5Q02548 391 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 LSAMPQ13449 338 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 ATG4DQ86TL0 474 aaPredicted RBP2.99□□□□□ -1.93
CHD9-213ENST00000564845 DTX2Q86UW9 622 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 CDC20BQ86Y33 519 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 OR5B3Q8NH48 314 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms