RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 ZNF250P15622 560 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 EEF1B2P24534 225 aaKnown RBP4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 PCP4P48539 62 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 TGM4P49221 684 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 GTF2A1P52655 376 aaPredicted RBP4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 GBX2P52951 348 aaPredicted RBP4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 WNT4P56705 351 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 KRTAP10-9P60411 292 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 RPL15P61313 204 aaKnown RBP4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 RPS23P62266 143 aaKnown RBP4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 ZNF92Q03936 586 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 TLE4Q04727 773 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 EMX1Q04741 257 aaPredicted RBP4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 ACSM1Q08AH1 577 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 PSG7Q13046 419 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 TNK1Q13470 666 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 ALKBH1Q13686 389 aaKnown RBP4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 GK2Q14410 553 aaPredicted RBP4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 CDK5R1Q15078 307 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 SPHARQ15513 63 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 ZNF829Q3KNS6 432 aaPredicted RBP4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 ALKBH6Q3KRA9 238 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 WDR38Q5JTN6 314 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 DMKNQ6E0U4 476 aaPredicted RBP4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 C11orf71Q6IPW1 123 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 CCDC144NLQ6NUI1 221 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 PET117Q6UWS5 81 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 FBXW12Q6X9E4 464 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 TMPRSS11AQ6ZMR5 421 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 FAM220AQ7Z4H9 259 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 DTX2Q86UW9 622 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 KLBQ86Z14 1044 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 ELMOD2Q8IZ81 293 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 ZFP41Q8N8Y5 198 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 OR1J1Q8NGS3 322 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 OR10AC1Q8NH08 325 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 TBC1D15Q8TC07 691 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 KLF14Q8TD94 323 aaPredicted RBP4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 IGFBPL1Q8WX77 278 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 RGP1Q92546 391 aaPredicted RBP4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 AKAP1Q92667 903 aaKnown RBP eCLIP4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 MRPL24Q96A35 216 aaKnown RBP4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 APOBEC3DQ96AK3 386 aaPredicted RBP4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 SGK3Q96BR1 496 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 MRPL48Q96GC5 212 aaKnown RBP4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 PGLYRP3Q96LB9 341 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 C8orf49Q96NF6 230 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 OPALINQ96PE5 141 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 ABHD1Q96SE0 405 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 KCNS3Q9BQ31 491 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 MND1Q9BWT6 205 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 KRTAP3-1Q9BYR8 98 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 MRPL37Q9BZE1 423 aaKnown RBP4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 BCL2L14Q9BZR8 327 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 OR2J1Q9GZK6 312 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 CCDC90BQ9GZT6 254 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 PBOV1Q9GZY1 135 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 MOB1AQ9H8S9 216 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 PLEKHF2Q9H8W4 249 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 ACOT13Q9NPJ3 140 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 PCDHB16Q9NRJ7 776 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 CA10Q9NS85 328 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 BABAM2Q9NXR7 383 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 MYEF2Q9P2K5 600 aaKnown RBP4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 EIF3KQ9UBQ5 218 aaKnown RBP4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 POU2F3Q9UKI9 436 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 FZR1Q9UM11 496 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 CSMD1Q96PZ7 3565 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 NOTCH2Q04721 2471 aa4.43□□□□□ -1.7
HERPUD1-207ENST00000563781 VPS13CQ709C8 3753 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 KRTAP4-8A0A0G2JLE6 195 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 LOC107986453A0A1B0GWG9 222 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 CD300LBA8K4G0 201 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 A8MV72 311 aaPredicted RBP4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 P2RY10O00398 339 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 XRCC2O43543 280 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 LMX1BO60663 402 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 PAGE4O60829 102 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 ZFPL1O95159 310 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 CLPTM1O96005 669 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 CD8AP01732 235 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 IGHV3-13P01766 116 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 SOD3P08294 240 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 OR4A8P0C604 315 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 DANCRP0C864 163 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 KITLGP21583 273 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 CCL1P22362 96 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 ACKR3P25106 362 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 SSTR2P30874 369 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 APOBEC3AP31941 199 aaPredicted RBP4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 FABP6P51161 128 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 TIRAPP58753 221 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 RPS11P62280 158 aaKnown RBP eCLIP4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 FAM3AP98173 230 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 BDH1Q02338 343 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 SLC3A1Q07837 685 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 TPBGQ13641 420 aa4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 HLXQ14774 488 aaPredicted RBP4.42□□□□□ -1.7
HERPUD1-207ENST00000563781 OR8B8Q15620 311 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms