RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 ZNF319Q9P2F9 582 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 WASF3Q9UPY6 502 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 MAP1BP46821 2468 aaKnown RBP10.43□□□□□ -0.74
ABCA3-203ENST00000563623 CCDC163A0A0D9SF12 145 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 hCG_1809904A0A1W2PP81 198 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 FAM230AA0A1W2PPH8 454 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 A0A1W2PQD3 144 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 A0A1W2PR64 198 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 A0A1W2PRV1 198 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 ZNF44P15621 663 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 EFNA3P52797 238 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 COTL1Q14019 142 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 C14orf28Q4W4Y0 310 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 MIDNQ504T8 468 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 TSPO2Q5TGU0 170 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 OR9K2Q8NGE7 335 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 MRPL24Q96A35 216 aaKnown RBP10.43□□□□□ -0.74
ABCA3-203ENST00000563623 PUS1Q9Y606 427 aaKnown RBP eCLIP10.43□□□□□ -0.74
ABCA3-203ENST00000563623 TRIOBPQ9H2D6 2365 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 A0A1W2PPH5 198 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 C9JQL5 133 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 FTCDNL1E5RQL4 147 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 ANGPTL7O43827 346 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 C1QL1O75973 258 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 GALNSP34059 522 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 APOBEC1P41238 236 aaKnown RBP10.43□□□□□ -0.74
ABCA3-203ENST00000563623 NUBP1P53384 320 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 CLDN17P56750 224 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 SUPT4H1P63272 117 aaKnown RBP10.43□□□□□ -0.74
ABCA3-203ENST00000563623 ACY1Q03154 408 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 KISS1Q15726 138 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 C20orf196Q8IYI0 205 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 OR5AS1Q8N127 324 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 SEMA6DQ8NFY4 1073 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 ADAMTS17Q8TE56 1095 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 RTBDNQ9BSG5 229 aaPredicted RBP10.43□□□□□ -0.74
ABCA3-203ENST00000563623 RBM24Q9BX46 236 aaKnown RBP10.43□□□□□ -0.74
ABCA3-203ENST00000563623 SLC5A7Q9GZV3 580 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 ZNF700Q9H0M5 742 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 NXT1Q9UKK6 140 aaKnown RBP10.43□□□□□ -0.74
ABCA3-203ENST00000563623 LHFPL6Q9Y693 200 aa10.43□□□□□ -0.74
ABCA3-203ENST00000563623 CSNK1EP49674 416 aaKnown RBP10.42□□□□□ -0.74
ABCA3-203ENST00000563623 RRADP55042 308 aa10.42□□□□□ -0.74
ABCA3-203ENST00000563623 PCK2Q16822 640 aa10.42□□□□□ -0.74
ABCA3-203ENST00000563623 OGFOD3Q6PK18 319 aa10.42□□□□□ -0.74
ABCA3-203ENST00000563623 MEX3BQ6ZN04 569 aaKnown RBP10.42□□□□□ -0.74
ABCA3-203ENST00000563623 STT3BQ8TCJ2 826 aa10.42□□□□□ -0.74
ABCA3-203ENST00000563623 EMG1Q92979 244 aaKnown RBP10.42□□□□□ -0.74
ABCA3-203ENST00000563623 SLAMF9Q96A28 289 aa10.42□□□□□ -0.74
ABCA3-203ENST00000563623 SAT2Q96F10 170 aaPredicted RBP10.42□□□□□ -0.74
ABCA3-203ENST00000563623 REEP6Q96HR9 211 aa10.42□□□□□ -0.74
ABCA3-203ENST00000563623 SRPK3Q9UPE1 567 aa10.42□□□□□ -0.74
ABCA3-203ENST00000563623 KCNIP3Q9Y2W7 256 aa10.42□□□□□ -0.74
ABCA3-203ENST00000563623 BORCS7-ASMTA0A0B4J1R7 106 aa10.42□□□□□ -0.74
ABCA3-203ENST00000563623 CCDC85CA6NKD9 419 aa10.42□□□□□ -0.74
ABCA3-203ENST00000563623 TLX3O43711 291 aaPredicted RBP10.42□□□□□ -0.74
ABCA3-203ENST00000563623 FHITP49789 147 aa10.42□□□□□ -0.74
ABCA3-203ENST00000563623 TAF9Q16594 264 aa10.42□□□□□ -0.74
ABCA3-203ENST00000563623 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.42□□□□□ -0.74
ABCA3-203ENST00000563623 FBXO46Q6PJ61 603 aaPredicted RBP10.42□□□□□ -0.74
ABCA3-203ENST00000563623 FAM24BQ8N5W8 94 aa10.42□□□□□ -0.74
ABCA3-203ENST00000563623 DTD1Q8TEA8 209 aa10.42□□□□□ -0.74
ABCA3-203ENST00000563623 CST4P01036 141 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 OMGP23515 440 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 PTGER4P35408 488 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 FASLGP48023 281 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 GABRA4P48169 554 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 QRFPP83859 136 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 PDCD1Q15116 288 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 AWAT1Q58HT5 328 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 FAM213BQ8TBF2 198 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 PRRX2Q99811 253 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 NAA11Q9BSU3 229 aaPredicted RBP10.41□□□□□ -0.74
ABCA3-203ENST00000563623 CNTNAP3Q9BZ76 1288 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 RAB33BQ9H082 229 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 KCNJ16Q9NPI9 418 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 SLC2A4RGQ9NR83 387 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 FAM212BQ9NTI7 297 aaPredicted RBP10.41□□□□□ -0.74
ABCA3-203ENST00000563623 TMEM100Q9NV29 134 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 GFOD1Q9NXC2 390 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 THADAQ6YHU6 1953 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 C5orf63A6NC05 138 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 BTBD17A6NE02 478 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 ANKUB1A6NFN9 424 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 LIPT2A6NK58 231 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 DBX1A6NMT0 343 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 ZNF729A6NN14 1252 aaPredicted RBP10.41□□□□□ -0.74
ABCA3-203ENST00000563623 HKR1P10072 659 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 FAM189A2Q15884 450 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 THEM4Q5T1C6 240 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 CDCP2Q5VXM1 449 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 GGNBP1Q5YKI7 109 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 OR5L1Q8NGL2 311 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 EDARADDQ8WWZ3 215 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 ST8SIA1Q92185 356 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 IP6K3Q96PC2 410 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 AQP10Q96PS8 301 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 CDCA3Q99618 268 aaPredicted RBP10.41□□□□□ -0.74
ABCA3-203ENST00000563623 GPR173Q9NS66 373 aa10.41□□□□□ -0.74
ABCA3-203ENST00000563623 ALKBH4Q9NXW9 302 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms