RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 FAM166BA8MTA8 275 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 C2orf74A8MZ97 194 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 K7EMT4 169 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 TNFRSF13BO14836 293 aaPredicted RBP4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 ERI3O43414 337 aaKnown RBP4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 UGT1A9O60656 530 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 SYF2O95926 243 aaKnown RBP4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 TBX6O95947 436 aaPredicted RBP4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 GCGP01275 180 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 IGHV4-39P01824 125 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 CDK1P06493 297 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 SNRPAP09012 282 aaKnown RBP4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 LIMS3P0CW19 117 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 LIMS4P0CW20 117 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 RAB4AP20338 218 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 BCL3P20749 454 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 SLC2A5P22732 501 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 GNRHRP30968 328 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 DCTP40126 519 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 TSFMP43897 325 aaKnown RBP4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 GSK3BP49841 420 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 CSRP3P50461 194 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 RAB7AP51149 207 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 HCCSP53701 268 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 BIDP55957 195 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 TAS2R60P59551 318 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 RND3P61587 244 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 S100A12P80511 92 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 HMGCS1Q01581 520 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 ECH1Q13011 328 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 IL18R1Q13478 541 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 KIR2DS1Q14954 304 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 SIX1Q15475 284 aaPredicted RBP4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 C14orf28Q4W4Y0 310 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 PYCR3Q53H96 274 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 ACER2Q5QJU3 275 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 HACD4Q5VWC8 232 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 FRMPD2BQ6IN97 320 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 MED27Q6P2C8 311 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 CEACAM19Q7Z692 300 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 LHFPL3Q86UP9 236 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 NAXDQ8IW45 347 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 RFESDQ8TAC1 157 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 STAG3L4Q8TBR4 150 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 KLK6Q92876 244 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 S100PBPQ96BU1 408 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 COX14Q96I36 57 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 ZNF681Q96N22 645 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 WFIKKN1Q96NZ8 548 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 KLF6Q99612 283 aaPredicted RBP4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 PRRT1Q99946 306 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 AGMATQ9BSE5 352 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 SRMSQ9H3Y6 488 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 LIME1Q9H400 295 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 INIPQ9NRY2 104 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 PLCXD1Q9NUJ7 323 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 GID8Q9NWU2 228 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 FBXO5Q9UKT4 447 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 ACOT9Q9Y305 439 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 L3MBTL1Q9Y468 752 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 CHD7Q9P2D1 2997 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 KIF26AQ9ULI4 1882 aaPredicted RBP4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 A0A1W2PR80 420 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 C21orf140B9A014 251 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 C9J4A7 227 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 NPIPB9F8W1W9 429 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 NME4O00746 187 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 RAD51CO43502 376 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 GATCO43716 136 aaKnown RBP4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 SNAP29O95721 258 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 SERPINA1P01009 418 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 KLK3P07288 261 aaPredicted RBP4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 RBMY1CP0DJD4 496 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 MPC1LP0DKB6 136 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 CD1DP15813 335 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 UGT2B7P16662 529 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 TBPP20226 339 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 TNFRSF1BP20333 461 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 ELK3P41970 407 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 KIR2DS4P43632 304 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 ATP4BP51164 291 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 ZNF140P52738 457 aaPredicted RBP4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 INHBCP55103 352 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 TAS2R31P59538 309 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 RANP62826 216 aaKnown RBP4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 TGFBR3Q03167 851 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 DLG1Q12959 904 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 FZD2Q14332 565 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 DAZAP2Q15038 168 aaPredicted RBP4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 ZBED5Q49AG3 693 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 VAX1Q5SQQ9 334 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 FAM219BQ5XKK7 198 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 DNM1P34Q6PK57 102 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 WDR74Q6RFH5 385 aaPredicted RBP4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 EPGNQ6UW88 154 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 CALHM1Q8IU99 346 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 CBLN2Q8IUK8 224 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 C10orf67Q8IYJ2 551 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 GPR26Q8NDV2 337 aa4.25□□□□□ -1.73
VPS35P1-201ENST00000563400 NEK7Q8TDX7 302 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms