RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 ZNRF4Q8WWF5 429 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 FAM46AQ96IP4 442 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 AKR1E2Q96JD6 320 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 NOL4LQ96MY1 436 aaPredicted RBP6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 NMNAT3Q96T66 252 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 KCNJ15Q99712 375 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 MICU1Q9BPX6 476 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 PAIP2Q9BPZ3 127 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 EBF4Q9BQW3 602 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 RTL8AQ9BWD3 113 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 PAPOLGQ9BWT3 736 aaKnown RBP6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 FN3KQ9H479 309 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 BRD7Q9NPI1 651 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 KCNG2Q9UJ96 466 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 MPC1Q9Y5U8 109 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 DNAH10Q8IVF4 4471 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 KMT2AQ03164 3969 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 OR6C68A6NDL8 312 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 RFPL4AA6NLU0 287 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 ANXA2P2A6NMY6 339 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 RFPL4AL1F8VTS6 287 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 ZNF728P0DKX0 622 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 TROVE2P10155 538 aaKnown RBP eCLIP6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 HIST1H1CP16403 213 aaKnown RBP6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 MYF6P23409 242 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 ACKR3P25106 362 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 OMPP47874 163 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 IDH3AP50213 366 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 RPS6KA3P51812 740 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 CAPZA1P52907 286 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 RAB25P57735 213 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 ACTA2P62736 377 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 ACTG2P63267 376 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 ACTC1P68032 377 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 ACTA1P68133 377 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 PRDX4Q13162 271 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 DYNC1I2Q13409 638 aaKnown RBP6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 FHL3Q13643 280 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 ZNF260Q3ZCT1 412 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 ZNF730Q6ZMV8 503 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 ACP7Q6ZNF0 438 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 ZNF561Q8N587 486 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 CSNK2A3Q8NEV1 391 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 OR4P4Q8NGL7 312 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 REEP6Q96HR9 211 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 RSRC1Q96IZ7 334 aaKnown RBP6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 OR51I2Q9H344 312 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 RPRD1BQ9NQG5 326 aaKnown RBP6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 KIAA2026Q5HYC2 2103 aa6.05□□□□□ -1.44
HERPUD1-206ENST00000563343 IGHV2-26A0A0B4J1V2 119 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 MEX3AA1L020 520 aaKnown RBP6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 ZNF850A8MQ14 1090 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 PRR23D1E9PI22 279 aaPredicted RBP6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 ARPC3O15145 178 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 TBX1O43435 398 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 LY86O95711 162 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 CST4P01036 141 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 TK1P04183 234 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 PRR23D2P0DMB1 279 aaPredicted RBP6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 PIPP12273 146 aaPredicted RBP6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 PRDX2P32119 198 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 IFNA8P32881 189 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 KDELR2P33947 212 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 SLC7A2P52569 658 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 SELENOWP63302 87 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 KIR2DS1Q14954 304 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 TIGD6Q17RP2 521 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 KRT71Q3SY84 523 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 NANOGP8Q6NSW7 305 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 PLBD1Q6P4A8 553 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 C16orf89Q6UX73 402 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 KRT74Q7RTS7 529 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 DCXRQ7Z4W1 244 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 VTCN1Q7Z7D3 282 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 CPLX4Q7Z7G2 160 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 ANKRD42Q8N9B4 389 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 OR4Q3Q8NH05 313 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 OR4K13Q8NH42 304 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 NDNFQ8TB73 568 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 CHPT1Q8WUD6 406 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 EDARADDQ8WWZ3 215 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 LINC00476Q8WZB0 136 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 SLAMF6Q96DU3 332 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 RNF170Q96K19 258 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 ERMAPQ96PL5 475 aaPredicted RBP6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 OR8B4Q96RC9 309 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 COPS4Q9BT78 406 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 CCDC28BQ9BUN5 200 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 FNDC11Q9BVV2 318 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 NDEL1Q9GZM8 345 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 DCLRE1BQ9H816 532 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 LINC00527Q9UJ94 153 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 TMEM5Q9Y2B1 443 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 N6AMT1Q9Y5N5 214 aa6.04□□□□□ -1.44
HERPUD1-206ENST00000563343 TVP23AA6NH52 213 aa6.03□□□□□ -1.44
HERPUD1-206ENST00000563343 TRIM64CA6NLI5 447 aa6.03□□□□□ -1.44
HERPUD1-206ENST00000563343 ZNF878C9JN71 531 aa6.03□□□□□ -1.44
HERPUD1-206ENST00000563343 M0QZK8 103 aa6.03□□□□□ -1.44
HERPUD1-206ENST00000563343 FXYD1O00168 92 aa6.03□□□□□ -1.44
HERPUD1-206ENST00000563343 LDLRAD4O15165 306 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms