RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 ZNF121P58317 390 aaPredicted RBP4.35□□□□□ -1.71
CNOT1-205ENST00000563283 GABARAPL2P60520 117 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 ERVS71-1P61550 626 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 MFGE8Q08431 387 aaPredicted RBP4.35□□□□□ -1.71
CNOT1-205ENST00000563283 SNTB2Q13425 540 aaKnown RBP4.35□□□□□ -1.71
CNOT1-205ENST00000563283 RSPO1Q2MKA7 263 aaPredicted RBP4.35□□□□□ -1.71
CNOT1-205ENST00000563283 ZNF829Q3KNS6 432 aaPredicted RBP4.35□□□□□ -1.71
CNOT1-205ENST00000563283 KCTD21Q4G0X4 260 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 CDONQ4KMG0 1287 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 SPATA46Q5T0L3 261 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 BCL2L15Q5TBC7 163 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 LIPNQ5VXI9 398 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 DEGS2Q6QHC5 323 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 ARL9Q6T311 187 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 DRAM2Q6UX65 266 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 TMPRSS11AQ6ZMR5 421 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 DNM1P46Q6ZS02 220 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 RFPL4BQ6ZWI9 263 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 FAM57BQ71RH2 274 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 PRSS48Q7RTY5 328 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 NAA40Q86UY6 237 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 COMMD2Q86X83 199 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 KLBQ86Z14 1044 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 ZNF101Q8IZC7 436 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 SYS1Q8N2H4 156 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 WFDC11Q8NEX6 87 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 OR52N1Q8NH53 320 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 SPRYD4Q8WW59 207 aaPredicted RBP4.35□□□□□ -1.71
CNOT1-205ENST00000563283 PGAM5Q96HS1 289 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 C4orf45Q96LM5 186 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 HIST1H2AAQ96QV6 131 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 MYCBPQ99417 103 aaPredicted RBP4.35□□□□□ -1.71
CNOT1-205ENST00000563283 DOK1Q99704 481 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 TRAF4Q9BUZ4 470 aaPredicted RBP4.35□□□□□ -1.71
CNOT1-205ENST00000563283 MND1Q9BWT6 205 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 YTHDF1Q9BYJ9 559 aaKnown RBP4.35□□□□□ -1.71
CNOT1-205ENST00000563283 NIPAL2Q9H841 368 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 CISD1Q9NZ45 108 aaKnown RBP4.35□□□□□ -1.71
CNOT1-205ENST00000563283 PTTG3PQ9NZH4 202 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 DNAJB11Q9UBS4 358 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 FZR1Q9UM11 496 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 ERGIC3Q9Y282 383 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 R4GMQ9 66 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 USF3Q68DE3 2245 aa4.35□□□□□ -1.71
CNOT1-205ENST00000563283 YLPM1P49750 1951 aaKnown RBP4.34□□□□□ -1.71
CNOT1-205ENST00000563283 CUBNO60494 3623 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 MED13LQ71F56 2210 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 PNMA8CA0A1B0GUJ8 204 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 TMEM269A0A1B0GVZ9 245 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 C5orf63A6NC05 138 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 E9PI62 339 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 H3BSH0 61 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 GPRIN2O60269 458 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 LY6HO94772 140 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 PNPP00491 289 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 NGFP01138 241 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 IGHV4-39P01824 125 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 APOC1P02654 83 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 RPSAP08865 295 aaKnown RBP4.34□□□□□ -1.71
CNOT1-205ENST00000563283 HSMCR30P0CW71 290 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 ATP6V1B1P15313 513 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 DNASE1P24855 282 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 OTX1P32242 354 aaPredicted RBP4.34□□□□□ -1.71
CNOT1-205ENST00000563283 TTKP33981 857 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 RBMXP38159 391 aaKnown RBP4.34□□□□□ -1.71
CNOT1-205ENST00000563283 CDKN1AP38936 164 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 RAD52P43351 418 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 RGS6P49758 472 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 WNT4P56705 351 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 PPP1CBP62140 327 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 RPS23P62266 143 aaKnown RBP4.34□□□□□ -1.71
CNOT1-205ENST00000563283 IRF3Q14653 427 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 MED22Q15528 200 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 NEDD8Q15843 81 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 ADIPOQQ15848 244 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 TIGD6Q17RP2 521 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 ODF4Q2M2E3 257 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 SNAI3Q3KNW1 292 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 KRTAP27-1Q3LI81 207 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 WDR38Q5JTN6 314 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 GLYATL3Q5SZD4 288 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 ZNF684Q5T5D7 378 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 XAF1Q6GPH4 301 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 ZNF544Q6NX49 715 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 ZNF773Q6PK81 442 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 UNQ6126/PRO20091Q6UXV3 157 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 LRP11Q86VZ4 500 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 ZCCHC24Q8N2G6 241 aaKnown RBP4.34□□□□□ -1.71
CNOT1-205ENST00000563283 C11orf44Q8N8P7 122 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 ZFP41Q8N8Y5 198 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 TSPAN14Q8NG11 270 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 OR8B12Q8NGG6 310 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 OR1J1Q8NGS3 322 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 OR2AE1Q8NHA4 323 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 SLC25A40Q8TBP6 338 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 RORBQ92753 470 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 APOBEC3DQ96AK3 386 aaPredicted RBP4.34□□□□□ -1.71
CNOT1-205ENST00000563283 PELI1Q96FA3 418 aa4.34□□□□□ -1.71
CNOT1-205ENST00000563283 NR1H4Q96RI1 486 aaPredicted RBP4.34□□□□□ -1.71
CNOT1-205ENST00000563283 SMR3AQ99954 134 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms