RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 PLCZ1Q86YW0 608 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 ZNF584Q8IVC4 421 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 CNPY4Q8N129 248 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 TMEM252Q8N6L7 170 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 EIF1ADQ8N9N8 165 aaKnown RBP2.69□□□□□ -1.98
HERC1-215ENST00000561436 RNF138Q8WVD3 245 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 ST8SIA1Q92185 356 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 HGDQ93099 445 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 SLC41A3Q96GZ6 507 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 HIST1H4GQ99525 98 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 OSBPL11Q9BXB4 747 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 DERL2Q9GZP9 239 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 SLITRK2Q9H156 845 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 METTL7AQ9H8H3 244 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 CXorf21Q9HAI6 301 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 C20orf96Q9NUD7 363 aaPredicted RBP2.69□□□□□ -1.98
HERC1-215ENST00000561436 AHSPQ9NZD4 102 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 ABCG2Q9UNQ0 655 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 SLC22A14Q9Y267 594 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 N6AMT1Q9Y5N5 214 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 FN1P02751 2386 aaKnown RBP2.69□□□□□ -1.98
HERC1-215ENST00000561436 ZNF106Q9H2Y7 1883 aaKnown RBP2.69□□□□□ -1.98
HERC1-215ENST00000561436 SHANK1Q9Y566 2161 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 FBN1P35555 2871 aaKnown RBP2.68□□□□□ -1.98
HERC1-215ENST00000561436 CROCCQ5TZA2 2017 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 ESPL1Q14674 2120 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 ITPR2Q14571 2701 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 APCP25054 2843 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 IGLV3-32A0A0A0MS00 114 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 A0A1B0GUS0 222 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 FAM240BA0A1B0GVZ2 78 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 A0A1W2PP18 115 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 GJE1A6NN92 205 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 H0YIV9 168 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 GOLGA8MH3BSY2 632 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 ZNF264O43296 627 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 TCF21O43680 179 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 ATP5LO75964 103 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 SNAPINO95295 136 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 CLDN9O95484 217 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 IGHG4P01861 327 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 ZNF17P17021 662 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 CSNK2A2P19784 350 aaPredicted RBP2.68□□□□□ -1.98
HERC1-215ENST00000561436 USF1P22415 310 aaPredicted RBP2.68□□□□□ -1.98
HERC1-215ENST00000561436 FKBP2P26885 142 aaKnown RBP2.68□□□□□ -1.98
HERC1-215ENST00000561436 IL12AP29459 219 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 CALCRP30988 508 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 SSR2P43308 183 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 SLCO1A2P46721 670 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 CCT3P49368 545 aaKnown RBP2.68□□□□□ -1.98
HERC1-215ENST00000561436 EFNA4P52798 201 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 PSMD4P55036 377 aaKnown RBP2.68□□□□□ -1.98
HERC1-215ENST00000561436 CLDN18P56856 261 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 LYZP61626 148 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 HMGCS1Q01581 520 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 SLAMF1Q13291 335 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 TGFBIQ15582 683 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 TMEM249Q2WGJ8 235 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 NCMAPQ5T1S8 102 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 PRAMEF20Q5VT98 475 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 OR4F3Q6IEY1 312 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 ANGPTL8Q6UXH0 198 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 C12orf54Q6X4T0 127 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 ACOT7LQ6ZUV0 252 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 PAGE2Q7Z2X7 111 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 ZNF679Q8IYX0 411 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 FTMTQ8N4E7 242 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 ZNF615Q8N8J6 731 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 CCDC71LQ8N9Z2 235 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 OR4K14Q8NGD5 310 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 STAG3L4Q8TBR4 150 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 C16orf74Q96GX8 76 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 PGLYRP4Q96LB8 373 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 COL21A1Q96P44 957 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 MS4A8Q9BY19 250 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 PARD6BQ9BYG5 372 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 YTHDF1Q9BYJ9 559 aaKnown RBP2.68□□□□□ -1.98
HERC1-215ENST00000561436 POTEKPQ9BYX7 375 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 SELENOIQ9C0D9 397 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 POLR2J2Q9GZM3 115 aaKnown RBP2.68□□□□□ -1.98
HERC1-215ENST00000561436 ACTR6Q9GZN1 396 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 MAGT1Q9H0U3 335 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 POLR2J3Q9H1A7 115 aaKnown RBP2.68□□□□□ -1.98
HERC1-215ENST00000561436 RBKSQ9H477 322 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 REEP4Q9H6H4 257 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 NARFLQ9H6Q4 476 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 RAB18Q9NP72 206 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 FBXO6Q9NRD1 293 aaPredicted RBP2.68□□□□□ -1.98
HERC1-215ENST00000561436 PRR34Q9NV39 138 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 NMRK1Q9NWW6 199 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 KLHL28Q9NXS3 571 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 TREM2Q9NZC2 230 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 ZNF639Q9UID6 485 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 MCTS1Q9ULC4 181 aaKnown RBP2.68□□□□□ -1.98
HERC1-215ENST00000561436 PIGLQ9Y2B2 252 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 ACOT9Q9Y305 439 aa2.68□□□□□ -1.98
HERC1-215ENST00000561436 RPL36Q9Y3U8 105 aaKnown RBP2.68□□□□□ -1.98
HERC1-215ENST00000561436 SPTBN1Q01082 2364 aaKnown RBP2.68□□□□□ -1.98
HERC1-215ENST00000561436 CHD5Q8TDI0 1954 aa2.67□□□□□ -1.98
HERC1-215ENST00000561436 A0A096LNT2 108 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms