RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 LRP11Q86VZ4 500 aa5.86□□□□□ -1.47
SPG11-224ENST00000561268 C1orf174Q8IYL3 243 aa5.86□□□□□ -1.47
SPG11-224ENST00000561268 ZNF101Q8IZC7 436 aa5.86□□□□□ -1.47
SPG11-224ENST00000561268 OR6V1Q8N148 313 aa5.86□□□□□ -1.47
SPG11-224ENST00000561268 ZCCHC24Q8N2G6 241 aaKnown RBP5.86□□□□□ -1.47
SPG11-224ENST00000561268 C9orf62Q8N4C0 152 aa5.86□□□□□ -1.47
SPG11-224ENST00000561268 TOMM5Q8N4H5 51 aa5.86□□□□□ -1.47
SPG11-224ENST00000561268 UXS1Q8NBZ7 420 aa5.86□□□□□ -1.47
SPG11-224ENST00000561268 CPEB3Q8NE35 698 aaKnown RBP5.86□□□□□ -1.47
SPG11-224ENST00000561268 OR13C2Q8NGS9 318 aa5.86□□□□□ -1.47
SPG11-224ENST00000561268 TRMT10AQ8TBZ6 339 aaKnown RBP5.86□□□□□ -1.47
SPG11-224ENST00000561268 HIST1H2ACQ93077 130 aa5.86□□□□□ -1.47
SPG11-224ENST00000561268 YIPF5Q969M3 257 aa5.86□□□□□ -1.47
SPG11-224ENST00000561268 FYTTD1Q96QD9 318 aaKnown RBP5.86□□□□□ -1.47
SPG11-224ENST00000561268 CNN2Q99439 309 aaKnown RBP5.86□□□□□ -1.47
SPG11-224ENST00000561268 ARPC5LQ9BPX5 153 aa5.86□□□□□ -1.47
SPG11-224ENST00000561268 SYT3Q9BQG1 590 aa5.86□□□□□ -1.47
SPG11-224ENST00000561268 WNT5BQ9H1J7 359 aa5.86□□□□□ -1.47
SPG11-224ENST00000561268 NLKQ9UBE8 527 aa5.86□□□□□ -1.47
SPG11-224ENST00000561268 CGGBP1Q9UFW8 167 aaPredicted RBP5.86□□□□□ -1.47
SPG11-224ENST00000561268 NUP50Q9UKX7 468 aa5.86□□□□□ -1.47
SPG11-224ENST00000561268 KCNS2Q9ULS6 477 aa5.86□□□□□ -1.47
SPG11-224ENST00000561268 SPEF1Q9Y4P9 236 aa5.86□□□□□ -1.47
SPG11-224ENST00000561268 TMEM14AQ9Y6G1 99 aa5.86□□□□□ -1.47
SPG11-224ENST00000561268 DSCAML1Q8TD84 2053 aa5.86□□□□□ -1.47
SPG11-224ENST00000561268 FBN3Q75N90 2809 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 LOC100509620A0A075B734 347 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 TRAV27A0A087WT01 109 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 A0A0A6YYJ9 748 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 A0A0G2JMP0 313 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 TEX13CA0A0J9YWL9 993 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 A0A0X1KG70 313 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 A0A1B0GWJ7 208 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 SHISA3A0PJX4 238 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 LRP5LA4QPB2 252 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 A6NIZ1 184 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 C17orf100A8MU93 164 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 J3QW42 95 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 IFNA2P01563 188 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 CD55P08174 381 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 CD37P11049 281 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 MSR1P21757 451 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 CDAP32320 146 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 FAUP35544 74 aaKnown RBP5.85□□□□□ -1.47
SPG11-224ENST00000561268 ALDH3B1P43353 468 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 OR3A3P47888 321 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 CCR9P51686 369 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 NKX2-5P52952 324 aaPredicted RBP5.85□□□□□ -1.47
SPG11-224ENST00000561268 DVL1P1P54792 670 aaPredicted RBP5.85□□□□□ -1.47
SPG11-224ENST00000561268 UCP2P55851 309 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 KLF3P57682 345 aaPredicted RBP5.85□□□□□ -1.47
SPG11-224ENST00000561268 CTXN1P60606 82 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 RAP1BP61224 184 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 RAP1AP62834 184 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 PSG4Q00888 419 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 CD83Q01151 205 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 ZNF85Q03923 595 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 KLF9Q13886 244 aaPredicted RBP5.85□□□□□ -1.47
SPG11-224ENST00000561268 MPPED2Q15777 294 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 PCGF3Q3KNV8 242 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 FAM209AQ5JX71 171 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 FAM120AOSQ5T036 256 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 IDNKQ5T6J7 187 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 LAMTOR1Q6IAA8 161 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 FDX2Q6P4F2 183 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 TEX261Q6UWH6 196 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 LYPD4Q6UWN0 246 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 CEACAM19Q7Z692 300 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 CCDC28AQ8IWP9 274 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 CDH26Q8IXH8 852 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 SAMD12Q8N8I0 201 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 OR4M2Q8NGB6 313 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 OR1J2Q8NGS2 313 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 RDH5Q92781 318 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 GHSRQ92847 366 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 MARS2Q96GW9 593 aaKnown RBP5.85□□□□□ -1.47
SPG11-224ENST00000561268 DDOQ99489 341 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 IFT27Q9BW83 186 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 ZNF416Q9BWM5 594 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 OR2H1Q9GZK4 316 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 OR51J1Q9H342 316 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 CDH20Q9HBT6 801 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 VSX1Q9NZR4 365 aaPredicted RBP5.85□□□□□ -1.47
SPG11-224ENST00000561268 ADAM18Q9Y3Q7 739 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 U3KQ87 197 aa5.85□□□□□ -1.47
SPG11-224ENST00000561268 LOC100289279A0A1B0GTE1 492 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 PRSS37A4D1T9 235 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 OR6C6A6NF89 314 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 IFITM5A6NNB3 132 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 HMSDA8MTL9 139 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 SULT1C2O00338 296 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 PHF1O43189 567 aaPredicted RBP5.84□□□□□ -1.47
SPG11-224ENST00000561268 NOS1APO75052 506 aaPredicted RBP5.84□□□□□ -1.47
SPG11-224ENST00000561268 GLCEO94923 617 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 OR2A4O95047 310 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 EIF4EP06730 217 aaKnown RBP5.84□□□□□ -1.47
SPG11-224ENST00000561268 GIPP09681 153 aaPredicted RBP5.84□□□□□ -1.47
SPG11-224ENST00000561268 H2AFB2P0C5Z0 115 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 CCL2P13500 99 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 CTLA4P16410 223 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms