RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 CLPXO76031 633 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 IGLV3-1P01715 115 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 MRPL3P09001 348 aaKnown RBP13.28□□□□□ -0.28
SNX1-213ENST00000561026 PSG2P11465 335 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 GABRA2P47869 451 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 UBE2E1P51965 193 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 RIPPLY1Q0D2K3 151 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 KLRD1Q13241 179 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 DMRTC1Q5HYR2 192 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 NCR3LG1Q68D85 454 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 FAHD1Q6P587 224 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 THAP5Q7Z6K1 395 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 COMMD2Q86X83 199 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 ZNRF1Q8ND25 227 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 AQP3Q92482 292 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 DUS3LQ96G46 650 aaKnown RBP13.28□□□□□ -0.28
SNX1-213ENST00000561026 OR8B4Q96RC9 309 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 GPR84Q9NQS5 396 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 ZNF222Q9UK12 451 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 VPREB3Q9UKI3 123 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 COPS3Q9UNS2 423 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 POMPQ9Y244 141 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 MAB21L2Q9Y586 359 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 TMEM14AQ9Y6G1 99 aa13.28□□□□□ -0.28
SNX1-213ENST00000561026 A0A1W2PQ09 198 aa13.27□□□□□ -0.29
SNX1-213ENST00000561026 OR5B21A6NL26 309 aa13.27□□□□□ -0.29
SNX1-213ENST00000561026 M0QZ24 198 aa13.27□□□□□ -0.29
SNX1-213ENST00000561026 TIMM23O14925 209 aa13.27□□□□□ -0.29
SNX1-213ENST00000561026 GSC2O15499 205 aa13.27□□□□□ -0.29
SNX1-213ENST00000561026 PAHP00439 452 aa13.27□□□□□ -0.29
SNX1-213ENST00000561026 SAA4P35542 130 aa13.27□□□□□ -0.29
SNX1-213ENST00000561026 ACSM1Q08AH1 577 aa13.27□□□□□ -0.29
SNX1-213ENST00000561026 BLMHQ13867 455 aa13.27□□□□□ -0.29
SNX1-213ENST00000561026 PTGES3Q15185 160 aaKnown RBP13.27□□□□□ -0.29
SNX1-213ENST00000561026 ZBTB37Q5TC79 503 aa13.27□□□□□ -0.29
SNX1-213ENST00000561026 LCN1P1Q5VSP4 162 aa13.27□□□□□ -0.29
SNX1-213ENST00000561026 Q6ZSV7 163 aa13.27□□□□□ -0.29
SNX1-213ENST00000561026 MOB3CQ70IA8 216 aa13.27□□□□□ -0.29
SNX1-213ENST00000561026 PNKDQ8N490 385 aa13.27□□□□□ -0.29
SNX1-213ENST00000561026 PPP1R14AQ96A00 147 aa13.27□□□□□ -0.29
SNX1-213ENST00000561026 SDSLQ96GA7 329 aa13.27□□□□□ -0.29
SNX1-213ENST00000561026 C16orf95Q9H693 158 aa13.27□□□□□ -0.29
SNX1-213ENST00000561026 ELL3Q9HB65 397 aaPredicted RBP13.27□□□□□ -0.29
SNX1-213ENST00000561026 NUFIP1Q9UHK0 495 aaKnown RBP13.27□□□□□ -0.29
SNX1-213ENST00000561026 MEIOCA2RUB1 952 aa13.26□□□□□ -0.29
SNX1-213ENST00000561026 PRKYO43930 277 aa13.26□□□□□ -0.29
SNX1-213ENST00000561026 FAHP16930 419 aa13.26□□□□□ -0.29
SNX1-213ENST00000561026 DAPP51397 102 aa13.26□□□□□ -0.29
SNX1-213ENST00000561026 RIDAP52758 137 aaKnown RBP13.26□□□□□ -0.29
SNX1-213ENST00000561026 ZNF829Q3KNS6 432 aaPredicted RBP13.26□□□□□ -0.29
SNX1-213ENST00000561026 PDLIM3Q53GG5 364 aaPredicted RBP13.26□□□□□ -0.29
SNX1-213ENST00000561026 DHRS7BQ6IAN0 325 aaPredicted RBP13.26□□□□□ -0.29
SNX1-213ENST00000561026 ASPHD2Q6ICH7 369 aa13.26□□□□□ -0.29
SNX1-213ENST00000561026 HAGHLQ6PII5 290 aaPredicted RBP13.26□□□□□ -0.29
SNX1-213ENST00000561026 SLC7A6OSQ96CW6 309 aaPredicted RBP13.26□□□□□ -0.29
SNX1-213ENST00000561026 RASL12Q9NYN1 266 aa13.26□□□□□ -0.29
SNX1-213ENST00000561026 ENPP5Q9UJA9 477 aa13.26□□□□□ -0.29
SNX1-213ENST00000561026 IKZF2Q9UKS7 526 aa13.26□□□□□ -0.29
SNX1-213ENST00000561026 PIGLQ9Y2B2 252 aa13.26□□□□□ -0.29
SNX1-213ENST00000561026 TRBV23-1A0A0A0MS06 115 aa13.25□□□□□ -0.29
SNX1-213ENST00000561026 MTRF1O75570 445 aaKnown RBP13.25□□□□□ -0.29
SNX1-213ENST00000561026 DHRS3O75911 302 aa13.25□□□□□ -0.29
SNX1-213ENST00000561026 TSPAN9O75954 239 aa13.25□□□□□ -0.29
SNX1-213ENST00000561026 NRASP01111 189 aa13.25□□□□□ -0.29
SNX1-213ENST00000561026 TTRP02766 147 aa13.25□□□□□ -0.29
SNX1-213ENST00000561026 TGFBR2P37173 567 aa13.25□□□□□ -0.29
SNX1-213ENST00000561026 ESRRGP62508 458 aa13.25□□□□□ -0.29
SNX1-213ENST00000561026 MFGE8Q08431 387 aaPredicted RBP13.25□□□□□ -0.29
SNX1-213ENST00000561026 MIDNQ504T8 468 aa13.25□□□□□ -0.29
SNX1-213ENST00000561026 PLCXD3Q63HM9 321 aa13.25□□□□□ -0.29
SNX1-213ENST00000561026 HCP5Q6MZN7 132 aa13.25□□□□□ -0.29
SNX1-213ENST00000561026 MEPCEQ7L2J0 689 aaKnown RBP13.25□□□□□ -0.29
SNX1-213ENST00000561026 BCDIN3DQ7Z5W3 292 aaKnown RBP13.25□□□□□ -0.29
SNX1-213ENST00000561026 TMEM185AQ8NFB2 350 aa13.25□□□□□ -0.29
SNX1-213ENST00000561026 OR5D13Q8NGL4 314 aa13.25□□□□□ -0.29
SNX1-213ENST00000561026 OR5R1Q8NH85 324 aa13.25□□□□□ -0.29
SNX1-213ENST00000561026 UTP4Q969X6 686 aaKnown RBP13.25□□□□□ -0.29
SNX1-213ENST00000561026 CNN2Q99439 309 aaKnown RBP13.25□□□□□ -0.29
SNX1-213ENST00000561026 RBM4BQ9BQ04 359 aaKnown RBP13.25□□□□□ -0.29
SNX1-213ENST00000561026 TTTY10Q9BZA0 68 aa13.25□□□□□ -0.29
SNX1-213ENST00000561026 MMP27Q9H306 513 aa13.25□□□□□ -0.29
SNX1-213ENST00000561026 SF3B6Q9Y3B4 125 aaKnown RBP13.25□□□□□ -0.29
SNX1-213ENST00000561026 TGP01266 2768 aa13.25□□□□□ -0.29
SNX1-213ENST00000561026 RFPL4AA6NLU0 287 aa13.24□□□□□ -0.29
SNX1-213ENST00000561026 RFPL4AL1F8VTS6 287 aa13.24□□□□□ -0.29
SNX1-213ENST00000561026 H0YAE9 185 aa13.24□□□□□ -0.29
SNX1-213ENST00000561026 SRSF10O75494 262 aaKnown RBP13.24□□□□□ -0.29
SNX1-213ENST00000561026 DNAJC8O75937 253 aaPredicted RBP13.24□□□□□ -0.29
SNX1-213ENST00000561026 CXCR4P61073 352 aa13.24□□□□□ -0.29
SNX1-213ENST00000561026 EFNB1P98172 346 aa13.24□□□□□ -0.29
SNX1-213ENST00000561026 ZNF684Q5T5D7 378 aa13.24□□□□□ -0.29
SNX1-213ENST00000561026 ZNF322Q6U7Q0 402 aaPredicted RBP13.24□□□□□ -0.29
SNX1-213ENST00000561026 ACP7Q6ZNF0 438 aa13.24□□□□□ -0.29
SNX1-213ENST00000561026 CD177Q8N6Q3 437 aa13.24□□□□□ -0.29
SNX1-213ENST00000561026 POC1AQ8NBT0 407 aa13.24□□□□□ -0.29
SNX1-213ENST00000561026 BEND2Q8NDZ0 799 aa13.24□□□□□ -0.29
SNX1-213ENST00000561026 APOL4Q9BPW4 351 aa13.24□□□□□ -0.29
SNX1-213ENST00000561026 PRRG3Q9BZD7 231 aa13.24□□□□□ -0.29
SNX1-213ENST00000561026 TCF7L1Q9HCS4 588 aa13.24□□□□□ -0.29
SNX1-213ENST00000561026 LOC110117498-PIK3R3F6TDL0 507 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms