RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 APODP05090 189 aa14.52□□□□□ -0.08
TPM1-228ENST00000560975 POU3F1Q03052 451 aaPredicted RBP14.52□□□□□ -0.08
TPM1-228ENST00000560975 ARMC6Q6NXE6 501 aa14.52□□□□□ -0.08
TPM1-228ENST00000560975 C1QL2Q7Z5L3 287 aa14.52□□□□□ -0.08
TPM1-228ENST00000560975 ARHGEF39Q8N4T4 335 aa14.52□□□□□ -0.08
TPM1-228ENST00000560975 OR14K1Q8NGZ2 314 aa14.52□□□□□ -0.08
TPM1-228ENST00000560975 SPPL3Q8TCT6 385 aa14.52□□□□□ -0.08
TPM1-228ENST00000560975 TOMM40LQ969M1 308 aa14.52□□□□□ -0.08
TPM1-228ENST00000560975 GINS3Q9BRX5 216 aa14.52□□□□□ -0.08
TPM1-228ENST00000560975 TUBD1Q9UJT1 453 aa14.52□□□□□ -0.08
TPM1-228ENST00000560975 CNTRLQ7Z7A1 2325 aa14.52□□□□□ -0.08
TPM1-228ENST00000560975 E5RGE8 158 aa14.52□□□□□ -0.09
TPM1-228ENST00000560975 FKTNO75072 461 aa14.52□□□□□ -0.09
TPM1-228ENST00000560975 HPNP05981 417 aa14.52□□□□□ -0.09
TPM1-228ENST00000560975 PGCP20142 388 aa14.52□□□□□ -0.09
TPM1-228ENST00000560975 TFF2Q03403 129 aa14.52□□□□□ -0.09
TPM1-228ENST00000560975 TSPO2Q5TGU0 170 aa14.52□□□□□ -0.09
TPM1-228ENST00000560975 NUP54Q7Z3B4 507 aa14.52□□□□□ -0.09
TPM1-228ENST00000560975 HIST3H2BBQ8N257 126 aa14.52□□□□□ -0.09
TPM1-228ENST00000560975 OR10S1Q8NGN2 331 aa14.52□□□□□ -0.09
TPM1-228ENST00000560975 RHBDD1Q8TEB9 315 aa14.52□□□□□ -0.09
TPM1-228ENST00000560975 PTPMT1Q8WUK0 201 aaPredicted RBP14.52□□□□□ -0.09
TPM1-228ENST00000560975 NUDT22Q9BRQ3 303 aa14.52□□□□□ -0.09
TPM1-228ENST00000560975 HDHD3Q9BSH5 251 aaPredicted RBP14.52□□□□□ -0.09
TPM1-228ENST00000560975 URM1Q9BTM9 101 aaKnown RBP14.52□□□□□ -0.09
TPM1-228ENST00000560975 ELL3Q9HB65 397 aaPredicted RBP14.52□□□□□ -0.09
TPM1-228ENST00000560975 SDHAF3Q9NRP4 125 aa14.52□□□□□ -0.09
TPM1-228ENST00000560975 FBLN5Q9UBX5 448 aa14.52□□□□□ -0.09
TPM1-228ENST00000560975 NSG2Q9Y328 171 aa14.52□□□□□ -0.09
TPM1-228ENST00000560975 GIMD1P0DJR0 217 aa14.52□□□□□ -0.09
TPM1-228ENST00000560975 AFF3P51826 1226 aaKnown RBP14.52□□□□□ -0.09
TPM1-228ENST00000560975 TAS2R60P59551 318 aa14.52□□□□□ -0.09
TPM1-228ENST00000560975 UBE2V2Q15819 145 aa14.52□□□□□ -0.09
TPM1-228ENST00000560975 OR2T2Q6IF00 324 aa14.52□□□□□ -0.09
TPM1-228ENST00000560975 DNM1P34Q6PK57 102 aa14.52□□□□□ -0.09
TPM1-228ENST00000560975 GPR84Q9NQS5 396 aa14.52□□□□□ -0.09
TPM1-228ENST00000560975 POLR1DQ9Y2S0 133 aa14.52□□□□□ -0.09
TPM1-228ENST00000560975 C2orf72A6NCS6 295 aa14.51□□□□□ -0.09
TPM1-228ENST00000560975 QDPRP09417 244 aa14.51□□□□□ -0.09
TPM1-228ENST00000560975 DLK1P80370 383 aa14.51□□□□□ -0.09
TPM1-228ENST00000560975 PRTGQ2VWP7 1150 aa14.51□□□□□ -0.09
TPM1-228ENST00000560975 ZFP62Q8NB50 900 aaPredicted RBP14.51□□□□□ -0.09
TPM1-228ENST00000560975 MISP3Q96FF7 219 aa14.51□□□□□ -0.09
TPM1-228ENST00000560975 ZNF700Q9H0M5 742 aa14.51□□□□□ -0.09
TPM1-228ENST00000560975 CUTCQ9NTM9 273 aa14.51□□□□□ -0.09
TPM1-228ENST00000560975 ARGFXA6NJG6 315 aa14.51□□□□□ -0.09
TPM1-228ENST00000560975 DHRS7CA6NNS2 312 aa14.51□□□□□ -0.09
TPM1-228ENST00000560975 TSTD3H0UI37 97 aa14.51□□□□□ -0.09
TPM1-228ENST00000560975 POLR2HP52434 150 aaKnown RBP14.51□□□□□ -0.09
TPM1-228ENST00000560975 DEGS2Q6QHC5 323 aa14.51□□□□□ -0.09
TPM1-228ENST00000560975 LYZL2Q7Z4W2 148 aa14.51□□□□□ -0.09
TPM1-228ENST00000560975 RNASE11Q8TAA1 199 aaKnown RBP14.51□□□□□ -0.09
TPM1-228ENST00000560975 ASB10Q8WXI3 467 aa14.51□□□□□ -0.09
TPM1-228ENST00000560975 TSLPQ969D9 159 aa14.51□□□□□ -0.09
TPM1-228ENST00000560975 TWSG1Q9GZX9 223 aa14.51□□□□□ -0.09
TPM1-228ENST00000560975 STRAPQ9Y3F4 350 aaKnown RBP14.51□□□□□ -0.09
TPM1-228ENST00000560975 TDRD6O60522 2096 aaKnown RBP14.51□□□□□ -0.09
TPM1-228ENST00000560975 MYO7BQ6PIF6 2116 aa14.5□□□□□ -0.09
TPM1-228ENST00000560975 TERTO14746 1132 aaKnown RBP14.5□□□□□ -0.09
TPM1-228ENST00000560975 PKIAP61925 76 aa14.5□□□□□ -0.09
TPM1-228ENST00000560975 USF2Q15853 346 aaPredicted RBP14.5□□□□□ -0.09
TPM1-228ENST00000560975 HPSE2Q8WWQ2 592 aa14.5□□□□□ -0.09
TPM1-228ENST00000560975 CPNE4Q96A23 557 aaPredicted RBP14.5□□□□□ -0.09
TPM1-228ENST00000560975 ZNF319Q9P2F9 582 aa14.5□□□□□ -0.09
TPM1-228ENST00000560975 COL4A2P08572 1712 aa14.5□□□□□ -0.09
TPM1-228ENST00000560975 RBFOX3A6NFN3 312 aa14.5□□□□□ -0.09
TPM1-228ENST00000560975 MS4A18H0YCH9 400 aa14.5□□□□□ -0.09
TPM1-228ENST00000560975 GPR137BO60478 399 aa14.5□□□□□ -0.09
TPM1-228ENST00000560975 NPIPB7O75200 414 aa14.5□□□□□ -0.09
TPM1-228ENST00000560975 C1orf61Q13536 156 aa14.5□□□□□ -0.09
TPM1-228ENST00000560975 MS4A18Q3C1V0 323 aa14.5□□□□□ -0.09
TPM1-228ENST00000560975 CRLF2Q9HC73 371 aa14.5□□□□□ -0.09
TPM1-228ENST00000560975 SUSD2Q9UGT4 822 aa14.5□□□□□ -0.09
TPM1-228ENST00000560975 LIPGQ9Y5X9 500 aa14.5□□□□□ -0.09
TPM1-228ENST00000560975 OR5H15A6NDH6 313 aa14.49□□□□□ -0.09
TPM1-228ENST00000560975 OR5H1A6NKK0 313 aa14.49□□□□□ -0.09
TPM1-228ENST00000560975 ZNF429Q86V71 674 aa14.49□□□□□ -0.09
TPM1-228ENST00000560975 OR52M1Q8NGK5 317 aa14.49□□□□□ -0.09
TPM1-228ENST00000560975 PHOSPHO2Q8TCD6 241 aa14.49□□□□□ -0.09
TPM1-228ENST00000560975 SHDQ96IW2 340 aa14.49□□□□□ -0.09
TPM1-228ENST00000560975 C5orf34Q96MH7 638 aa14.49□□□□□ -0.09
TPM1-228ENST00000560975 PECRQ9BY49 303 aa14.49□□□□□ -0.09
TPM1-228ENST00000560975 PADI1Q9ULC6 663 aa14.49□□□□□ -0.09
TPM1-228ENST00000560975 OR5AC1P0C628 307 aa14.49□□□□□ -0.09
TPM1-228ENST00000560975 TRGC1P0CF51 173 aa14.49□□□□□ -0.09
TPM1-228ENST00000560975 PIGPP57054 158 aa14.49□□□□□ -0.09
TPM1-228ENST00000560975 RND3P61587 244 aa14.49□□□□□ -0.09
TPM1-228ENST00000560975 C6orf201Q7Z4U5 140 aa14.49□□□□□ -0.09
TPM1-228ENST00000560975 OR8B12Q8NGG6 310 aa14.49□□□□□ -0.09
TPM1-228ENST00000560975 LURAP1Q96LR2 239 aa14.49□□□□□ -0.09
TPM1-228ENST00000560975 PLA2G2FQ9BZM2 168 aa14.49□□□□□ -0.09
TPM1-228ENST00000560975 RNF208Q9H0X6 261 aa14.49□□□□□ -0.09
TPM1-228ENST00000560975 MYO15AQ9UKN7 3530 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 CPAMD8Q8IZJ3 1885 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 CRYM-AS1A6NIL9 109 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 K7N7A8 449 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 SUCLG1P53597 346 aaKnown RBP14.48□□□□□ -0.09
TPM1-228ENST00000560975 HSD17B7P56937 341 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 FXYD4P59646 89 aa14.48□□□□□ -0.09
TPM1-228ENST00000560975 HIKESHIQ53FT3 197 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms