RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 ZNF679Q8IYX0 411 aa8.39□□□□□ -1.07
LDLR-214ENST00000560628 ZNRF1Q8ND25 227 aa8.39□□□□□ -1.07
LDLR-214ENST00000560628 OR5A2Q8NGI9 324 aa8.39□□□□□ -1.07
LDLR-214ENST00000560628 ZNF671Q8TAW3 534 aa8.39□□□□□ -1.07
LDLR-214ENST00000560628 WFDC12Q8WWY7 111 aa8.39□□□□□ -1.07
LDLR-214ENST00000560628 ASB17Q8WXJ9 295 aa8.39□□□□□ -1.07
LDLR-214ENST00000560628 DNAJC9Q8WXX5 260 aa8.39□□□□□ -1.07
LDLR-214ENST00000560628 DYRK2Q92630 601 aa8.39□□□□□ -1.07
LDLR-214ENST00000560628 DUS3LQ96G46 650 aaKnown RBP8.39□□□□□ -1.07
LDLR-214ENST00000560628 ZNF488Q96MN9 340 aa8.39□□□□□ -1.07
LDLR-214ENST00000560628 IL4I1Q96RQ9 567 aa8.39□□□□□ -1.07
LDLR-214ENST00000560628 CNN2Q99439 309 aaKnown RBP8.39□□□□□ -1.07
LDLR-214ENST00000560628 DNTTIP1Q9H147 329 aa8.39□□□□□ -1.07
LDLR-214ENST00000560628 PIGLQ9Y2B2 252 aa8.39□□□□□ -1.07
LDLR-214ENST00000560628 TMEM14AQ9Y6G1 99 aa8.39□□□□□ -1.07
LDLR-214ENST00000560628 A0A1W2PQ09 198 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 A6NIN4 97 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 G3V2T6 193 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 NPFFO15130 113 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 NRASP01111 189 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 TTRP02766 147 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 EEF1B2P24534 225 aaKnown RBP8.38□□□□□ -1.07
LDLR-214ENST00000560628 CAPZA1P52907 286 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 KRTAP10-3P60369 221 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 CXCR4P61073 352 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 ESRRGP62508 458 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 TAF9Q16594 264 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 ZNF829Q3KNS6 432 aaPredicted RBP8.38□□□□□ -1.07
LDLR-214ENST00000560628 AADACL4Q5VUY2 407 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 ZNF322Q6U7Q0 402 aaPredicted RBP8.38□□□□□ -1.07
LDLR-214ENST00000560628 KRT74Q7RTS7 529 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 LDLRAD3Q86YD5 345 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 SLC35F2Q8IXU6 374 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 BATF2Q8N1L9 274 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 TMEM185AQ8NFB2 350 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 C8orf46Q8TAG6 207 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 AQP3Q92482 292 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 TNFRSF14Q92956 283 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 DMRTB1Q96MA1 342 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 DPAGT1Q9H3H5 408 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 GPR173Q9NS66 373 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 KRT84Q9NSB2 600 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 FAM53CQ9NYF3 392 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 NUFIP1Q9UHK0 495 aaKnown RBP8.38□□□□□ -1.07
LDLR-214ENST00000560628 CAB39Q9Y376 341 aaPredicted RBP8.38□□□□□ -1.07
LDLR-214ENST00000560628 RNF114Q9Y508 228 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 MAB21L2Q9Y586 359 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 MGAM2Q2M2H8 2515 aa8.38□□□□□ -1.07
LDLR-214ENST00000560628 MEIOCA2RUB1 952 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 RFPL4AA6NLU0 287 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 ZAR1LA6NP61 321 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 ZNF670-ZNF695F2Z2N8 137 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 LOC110117498-PIK3R3F6TDL0 507 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 RFPL4AL1F8VTS6 287 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 H0YAE9 185 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 H3BSH0 61 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 SYNGR1O43759 233 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 SRSF10O75494 262 aaKnown RBP8.37□□□□□ -1.07
LDLR-214ENST00000560628 RPP14O95059 124 aaKnown RBP8.37□□□□□ -1.07
LDLR-214ENST00000560628 PAHP00439 452 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 IGLV3-1P01715 115 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 FBP1P09467 338 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 ATP6V1B1P15313 513 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 SAA4P35542 130 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 POLR2IP36954 125 aaKnown RBP8.37□□□□□ -1.07
LDLR-214ENST00000560628 CEBPDP49716 269 aaPredicted RBP8.37□□□□□ -1.07
LDLR-214ENST00000560628 CAV3P56539 151 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 EFNB1P98172 346 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 GUCA2AQ02747 115 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 BNIP1Q12981 228 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 BLMHQ13867 455 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 ATP6AP1Q15904 470 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 ZNF684Q5T5D7 378 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 SLX4IPQ5VYV7 408 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 BRICD5Q6PL45 260 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 METAP1DQ6UB28 335 aaPredicted RBP8.37□□□□□ -1.07
LDLR-214ENST00000560628 ACP7Q6ZNF0 438 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 ASRGL1Q7L266 308 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 FAM185AQ8N0U4 392 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 CD177Q8N6Q3 437 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 LINC01006Q8NI28 216 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 TMEM163Q8TC26 289 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 NPRL2Q8WTW4 380 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 C17orf50Q8WW18 174 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 TBX5Q99593 518 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 ADGRL4Q9HBW9 690 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 MRM2Q9UI43 246 aaKnown RBP8.37□□□□□ -1.07
LDLR-214ENST00000560628 ENPP5Q9UJA9 477 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 ZNF222Q9UK12 451 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 OR52A1Q9UKL2 312 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 SLC22A13Q9Y226 551 aa8.37□□□□□ -1.07
LDLR-214ENST00000560628 A0A1B0GTI1 187 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 BTBD17A6NE02 478 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 SLC22A31A6NKX4 558 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 OR5B21A6NL26 309 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 M0R1W7 72 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 MTRF1O75570 445 aaKnown RBP8.36□□□□□ -1.07
LDLR-214ENST00000560628 DHRS3O75911 302 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 APOL3O95236 402 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 FASP25445 335 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms