RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.5□□□□□ -1.05
CDC42BPB-207ENST00000560492 ERI1Q8IV48 349 aaKnown RBP8.5□□□□□ -1.05
CDC42BPB-207ENST00000560492 ZDHHC23Q8IYP9 409 aa8.5□□□□□ -1.05
CDC42BPB-207ENST00000560492 LINC00471Q8N535 108 aa8.5□□□□□ -1.05
CDC42BPB-207ENST00000560492 RNF148Q8N7C7 305 aa8.5□□□□□ -1.05
CDC42BPB-207ENST00000560492 SLC37A3Q8NCC5 494 aa8.5□□□□□ -1.05
CDC42BPB-207ENST00000560492 OR4M1Q8NGD0 313 aa8.5□□□□□ -1.05
CDC42BPB-207ENST00000560492 OR52H1Q8NGJ2 320 aa8.5□□□□□ -1.05
CDC42BPB-207ENST00000560492 ANGPTL6Q8NI99 470 aa8.5□□□□□ -1.05
CDC42BPB-207ENST00000560492 RPS4Y2Q8TD47 263 aa8.5□□□□□ -1.05
CDC42BPB-207ENST00000560492 ZNRF4Q8WWF5 429 aa8.5□□□□□ -1.05
CDC42BPB-207ENST00000560492 C7orf34Q96L11 122 aa8.5□□□□□ -1.05
CDC42BPB-207ENST00000560492 DDOQ99489 341 aa8.5□□□□□ -1.05
CDC42BPB-207ENST00000560492 BTBD10Q9BSF8 475 aa8.5□□□□□ -1.05
CDC42BPB-207ENST00000560492 C1orf21Q9H246 121 aa8.5□□□□□ -1.05
CDC42BPB-207ENST00000560492 YY1AP1Q9H869 796 aa8.5□□□□□ -1.05
CDC42BPB-207ENST00000560492 ABCB9Q9NP78 766 aa8.5□□□□□ -1.05
CDC42BPB-207ENST00000560492 SERTAD4Q9NUC0 356 aa8.5□□□□□ -1.05
CDC42BPB-207ENST00000560492 RRP15Q9Y3B9 282 aaKnown RBP8.5□□□□□ -1.05
CDC42BPB-207ENST00000560492 KMT2CQ8NEZ4 4911 aaKnown RBP8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 K7EIL1 84 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 IGHA1P01876 353 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 ALDOBP05062 364 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 ARG1P05089 322 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 PSG2P11465 335 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 PIPP12273 146 aaPredicted RBP8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 GSSP48637 474 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 ERVFRD-1P60508 538 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 RPL31P62899 125 aaKnown RBP8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 SLC35A2P78381 396 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 DYNC1I2Q13409 638 aaKnown RBP8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 CRMP1Q14194 572 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 TMEM95Q3KNT9 176 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 RPL13AP3Q6NVV1 102 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 CRIP3Q6Q6R5 217 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 CCBE1Q6UXH8 406 aaPredicted RBP8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 LHFPL4Q7Z7J7 247 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 COMMD2Q86X83 199 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 OR5P3Q8WZ94 311 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 DPF1Q92782 380 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 DHRS1Q96LJ7 313 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 FUZQ9BT04 418 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 CDCA4Q9BXL8 241 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 TLNRD1Q9H1K6 362 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 C19orf12Q9NSK7 152 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 DCAF13Q9NV06 445 aaKnown RBP8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 PITPNC1Q9UKF7 332 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 TCF19Q9Y242 345 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 CDH10Q9Y6N8 788 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 COL7A1Q02388 2944 aa8.49□□□□□ -1.05
CDC42BPB-207ENST00000560492 IGKV1D-17A0A075B6S4 117 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 RIIAD1A6NNX1 92 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 ZNF732B4DXR9 585 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 E9PQ18 207 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 F2RL2O00254 374 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 SLC1A7O00341 560 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 RHBDL1O75783 438 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 CIB2O75838 187 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 CLIC3O95833 236 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 IFNGP01579 166 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 FABP3P05413 133 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 CLUP10909 449 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 CCL3L1P16619 93 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 SPI1P17947 270 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 PSME3P61289 254 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 SSX2Q16385 188 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 KLHL12Q53G59 568 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 CEP78Q5JTW2 689 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 SAMD4BQ5PRF9 694 aaKnown RBP8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 THAP5Q7Z6K1 395 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 DEFB107AQ8IZN7 70 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 OR5AU1Q8NGC0 362 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 OR9Q2Q8NGE9 314 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 OR2T27Q8NH04 317 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 ZNF671Q8TAW3 534 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 CAPSLQ8WWF8 208 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 FOXRED1Q96CU9 486 aaPredicted RBP8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 SLC7A6OSQ96CW6 309 aaPredicted RBP8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 PYURFQ96I23 114 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 WWC2-AS2Q96NR7 200 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 INTS14Q96SY0 518 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 ABHD6Q9BV23 337 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 TSSK6Q9BXA6 273 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 RGCCQ9H4X1 137 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 USE1Q9NZ43 259 aa8.48□□□□□ -1.05
CDC42BPB-207ENST00000560492 WI2-2373I1.2A0A1W2PRP0 233 aa8.47□□□□□ -1.05
CDC42BPB-207ENST00000560492 TCRBV4S1A1TA0A5B7 111 aa8.47□□□□□ -1.05
CDC42BPB-207ENST00000560492 MEX3AA1L020 520 aaKnown RBP8.47□□□□□ -1.05
CDC42BPB-207ENST00000560492 RFPL4AA6NLU0 287 aa8.47□□□□□ -1.05
CDC42BPB-207ENST00000560492 ADARB2-AS1A8MUL3 147 aa8.47□□□□□ -1.05
CDC42BPB-207ENST00000560492 RFPL4AL1F8VTS6 287 aa8.47□□□□□ -1.05
CDC42BPB-207ENST00000560492 H3BUI4 141 aa8.47□□□□□ -1.05
CDC42BPB-207ENST00000560492 SOX14O95416 240 aa8.47□□□□□ -1.05
CDC42BPB-207ENST00000560492 ZNF3P17036 446 aa8.47□□□□□ -1.05
CDC42BPB-207ENST00000560492 ACKR3P25106 362 aa8.47□□□□□ -1.05
CDC42BPB-207ENST00000560492 HOXD3P31249 432 aaPredicted RBP8.47□□□□□ -1.05
CDC42BPB-207ENST00000560492 BLVRAP53004 296 aa8.47□□□□□ -1.05
CDC42BPB-207ENST00000560492 OR12D2P58182 307 aa8.47□□□□□ -1.05
CDC42BPB-207ENST00000560492 GNG3P63215 75 aa8.47□□□□□ -1.05
CDC42BPB-207ENST00000560492 SMIM21Q3B7S5 101 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms