RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 LINC01560Q8TB33 94 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 TRMT10AQ8TBZ6 339 aaKnown RBP5.51□□□□□ -1.53
SPG11-221ENST00000560299 NPRL2Q8WTW4 380 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 C15orf40Q8WUR7 153 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 RAB40AQ8WXH6 277 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 PTX4Q96A99 478 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 FAM3DQ96BQ1 224 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 S100A16Q96FQ6 103 aaKnown RBP5.51□□□□□ -1.53
SPG11-221ENST00000560299 PLPPR2Q96GM1 343 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 DIRAS2Q96HU8 199 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 RNF170Q96K19 258 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 WDFY2Q96P53 400 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 SLC30A2Q9BRI3 323 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 WDR12Q9GZL7 423 aaKnown RBP5.51□□□□□ -1.53
SPG11-221ENST00000560299 CST11Q9H112 138 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 POFUT1Q9H488 388 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 ZNF442Q9H7R0 627 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 CNTD2Q9H8S5 307 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 CA10Q9NS85 328 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 FBXO9Q9UK97 447 aaPredicted RBP5.51□□□□□ -1.53
SPG11-221ENST00000560299 RAB22AQ9UL26 194 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 ING4Q9UNL4 249 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 MRPS28Q9Y2Q9 187 aaKnown RBP5.51□□□□□ -1.53
SPG11-221ENST00000560299 RNF115Q9Y4L5 304 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 PMF1-BGLAPU3KQ54 211 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 SPG11Q96JI7 2443 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 IGKV1-9A0A0C4DH69 117 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.5□□□□□ -1.53
SPG11-221ENST00000560299 FABP12A6NFH5 140 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 TMEM210A6NLX4 147 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 ZNF732B4DXR9 585 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 H3BUI4 141 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 CTDSP2O14595 271 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 PAHP00439 452 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 CSTBP04080 98 aaKnown RBP5.5□□□□□ -1.53
SPG11-221ENST00000560299 CA6P23280 308 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 ANOS1P23352 680 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 GRNP28799 593 aaKnown RBP5.5□□□□□ -1.53
SPG11-221ENST00000560299 APOBEC3AP31941 199 aaPredicted RBP5.5□□□□□ -1.53
SPG11-221ENST00000560299 TNFSF8P32971 234 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 MPV17P39210 176 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 POU3F4P49335 361 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 PITPNAQ00169 270 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 ZNF846Q147U1 533 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 P2RY14Q15391 338 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 RSU1Q15404 277 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 NKPD1Q17RQ9 610 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 C2orf76Q3KRA6 126 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 UBE2NLQ5JXB2 153 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 ASPHD2Q6ICH7 369 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 RAB12Q6IQ22 244 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 FAM166AQ6J272 317 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 METAP1DQ6UB28 335 aaPredicted RBP5.5□□□□□ -1.53
SPG11-221ENST00000560299 GLIPR1L1Q6UWM5 242 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 C22orf34Q6ZV56 151 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 OR2W3Q7Z3T1 314 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 ZSCAN4Q8NAM6 433 aaPredicted RBP5.5□□□□□ -1.53
SPG11-221ENST00000560299 OR51D1Q8NGF3 324 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 TBC1D15Q8TC07 691 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 UBASH3BQ8TF42 649 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 TMEM171Q8WVE6 324 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 TNFAIP8L1Q8WVP5 186 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 OR5P3Q8WZ94 311 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 MRPL24Q96A35 216 aaKnown RBP5.5□□□□□ -1.53
SPG11-221ENST00000560299 POM121Q96HA1 1249 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 DIRC2Q96SL1 478 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 GFI1Q99684 422 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 URM1Q9BTM9 101 aaKnown RBP5.5□□□□□ -1.53
SPG11-221ENST00000560299 ADAT1Q9BUB4 502 aaKnown RBP5.5□□□□□ -1.53
SPG11-221ENST00000560299 METTL9Q9H1A3 318 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 CXXC4Q9H2H0 198 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 PLK3Q9H4B4 646 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 ELL3Q9HB65 397 aaPredicted RBP5.5□□□□□ -1.53
SPG11-221ENST00000560299 RHOFQ9HBH0 211 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 DIABLOQ9NR28 239 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 FAIMQ9NVQ4 179 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 TAAR3PQ9P1P4 343 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 FBLN5Q9UBX5 448 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 ZDHHC8Q9ULC8 765 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 FZR1Q9UM11 496 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 EDARQ9UNE0 448 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 POLDIP2Q9Y2S7 368 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 ABCA4P78363 2273 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 FBN2P35556 2912 aa5.5□□□□□ -1.53
SPG11-221ENST00000560299 IGLV3-9A0A075B6K5 115 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 A0A0A6YYH2 397 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 PQLC2LA1A4F0 135 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 LRP5LA4QPB2 252 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 A6NJ64 397 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 PRSS44E7EML9 344 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 TRAPPC2LH3BP13 241 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 HPGDSO60760 199 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 TPPPO94811 219 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 CHRM2P08172 466 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 OR4A8P0C604 315 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 BMP4P12644 408 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 GTF2F2P13984 249 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 COX6B1P14854 86 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 RAB6AP20340 208 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 CD40LGP29965 261 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms