RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 MYL9P24844 172 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 AZGP1P25311 298 aaKnown RBP4.43□□□□□ -1.7
SPG11-220ENST00000559933 RPS19P39019 145 aaKnown RBP4.43□□□□□ -1.7
SPG11-220ENST00000559933 RAD52P43351 418 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 OR3A4PP47883 348 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 GPM6AP51674 278 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 KLF3P57682 345 aaPredicted RBP4.43□□□□□ -1.7
SPG11-220ENST00000559933 GMFBP60983 142 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 GPR50Q13585 617 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 P2RY14Q15391 338 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 TESK1Q15569 626 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 MST1LQ2TV78 715 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 C3orf36Q3SXR2 165 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 HSD17B12Q53GQ0 312 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 HES5Q5TA89 166 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 LCE5AQ5TCM9 118 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 MBNL2Q5VZF2 373 aaKnown RBP4.43□□□□□ -1.7
SPG11-220ENST00000559933 ZNF544Q6NX49 715 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 DTX3Q8N9I9 347 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 ACBD4Q8NC06 268 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 NUP37Q8NFH4 326 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 OR1M1Q8NGA1 313 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 SYNPRQ8TBG9 265 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 MRPL24Q96A35 216 aaKnown RBP4.43□□□□□ -1.7
SPG11-220ENST00000559933 ZNF488Q96MN9 340 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 GAL3ST1Q99999 423 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 TMEM204Q9BSN7 226 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 ADAT1Q9BUB4 502 aaKnown RBP4.43□□□□□ -1.7
SPG11-220ENST00000559933 DCSTAMPQ9H295 470 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 LIME1Q9H400 295 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 ESRP2Q9H6T0 727 aaKnown RBP4.43□□□□□ -1.7
SPG11-220ENST00000559933 ZNF275Q9NSD4 429 aaPredicted RBP4.43□□□□□ -1.7
SPG11-220ENST00000559933 DCAF16Q9NXF7 216 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 ZNF581Q9P0T4 197 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 TAAR3PQ9P1P4 343 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 FBN3Q75N90 2809 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 RAI1Q7Z5J4 1906 aaPredicted RBP4.42□□□□□ -1.7
SPG11-220ENST00000559933 ABCA4P78363 2273 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 IGLV3-9A0A075B6K5 115 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 SMIM31A0A1B0GVY4 71 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 A0A1W2PP11 408 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 LOC390937A0A1W2PQ73 354 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 IQCF6A8MYZ5 107 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 ZNF732B4DXR9 585 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 SPRY1O43609 319 aaPredicted RBP4.42□□□□□ -1.7
SPG11-220ENST00000559933 SULT1B1O43704 296 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 ANGPTL7O43827 346 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 RHBDL1O75783 438 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 GATBO75879 557 aaKnown RBP4.42□□□□□ -1.7
SPG11-220ENST00000559933 PAHP00439 452 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 SERPINA3P01011 423 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 NRASP01111 189 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 IGHV1-46P01743 117 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 HCKP08631 526 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 PRF1P14222 555 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 COX6B1P14854 86 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 ZNF250P15622 560 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 ATF1P18846 271 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 CD53P19397 219 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 SRMP19623 302 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 KITLGP21583 273 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 MAPK3P27361 379 aaPredicted RBP4.42□□□□□ -1.7
SPG11-220ENST00000559933 GCH1P30793 250 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 FGF9P31371 208 aaPredicted RBP4.42□□□□□ -1.7
SPG11-220ENST00000559933 GLRXP35754 106 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 DDOSTP39656 456 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 POU3F4P49335 361 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 TMBIM6P55061 237 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 SNU13P55769 128 aaKnown RBP4.42□□□□□ -1.7
SPG11-220ENST00000559933 KRTAP10-9P60411 292 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 CACNA1DQ01668 2161 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 RIPPLY1Q0D2K3 151 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 OR8G1Q15617 311 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 ZNF718Q3SXZ3 478 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 CLVS2Q5SYC1 327 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 DDI2Q5TDH0 399 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 TMEM42Q69YG0 159 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 SP5Q6BEB4 398 aaPredicted RBP4.42□□□□□ -1.7
SPG11-220ENST00000559933 ZNF529Q6P280 563 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 Q6ZSR3 168 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 ZNF826PQ6ZT77 177 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 C1QL2Q7Z5L3 287 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 BIVMQ86UB2 503 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 TMEM200AQ86VY9 491 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 ANGPTL5Q86XS5 388 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 ZDHHC23Q8IYP9 409 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 JAGN1Q8N5M9 183 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 MS4A15Q8N5U1 240 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 PARP16Q8N5Y8 322 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 C19orf18Q8NEA5 215 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 OR8G5Q8NG78 346 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 OR2Z1Q8NG97 314 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 OR4D6Q8NGJ1 314 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 OR5L1Q8NGL2 311 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 OR10K1Q8NGX5 313 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 DYNC2LI1Q8TCX1 351 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 HAVCR2Q8TDQ0 301 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 FAM222BQ8WU58 562 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 RAB2BQ8WUD1 216 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 SLAMF9Q96A28 289 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms