RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 ZFP36L1Q07352 338 aaKnown RBP8.76□□□□□ -1.01
LRRC28-216ENST00000559819 RAB32Q13637 225 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 BRICD5Q6PL45 260 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 FOXRED2Q8IWF2 684 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 OR52H1Q8NGJ2 320 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 OR14L1PQ8NHC6 308 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 FGFBP3Q8TAT2 258 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 PP6455Q8WZ26 134 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 SPTSSAQ969W0 71 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 NTNG2Q96CW9 530 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 LRRC46Q96FV0 321 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 TM2D1Q9BX74 207 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 SLC39A1Q9NY26 324 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 TNRC6BQ9UPQ9 1833 aaKnown RBP8.76□□□□□ -1.01
LRRC28-216ENST00000559819 TEX13DA0A0J9YY54 714 aaPredicted RBP8.76□□□□□ -1.01
LRRC28-216ENST00000559819 SGCEO43556 437 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 CXCL13O43927 109 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 SERPINA5P05154 406 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 ALDH3B1P43353 468 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 SUCLG1P53597 346 aaKnown RBP8.76□□□□□ -1.01
LRRC28-216ENST00000559819 RRADP55042 308 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 S100A10P60903 97 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 TAF9Q16594 264 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 SLC16A14Q7RTX9 510 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 TMEM17Q86X19 198 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 SEMA6DQ8NFY4 1073 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 TMED6Q8WW62 240 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 PHYHIPLQ96FC7 376 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 REEP6Q96HR9 211 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 NECAB3Q96P71 396 aaPredicted RBP8.76□□□□□ -1.01
LRRC28-216ENST00000559819 ZNF2Q9BSG1 426 aaPredicted RBP8.76□□□□□ -1.01
LRRC28-216ENST00000559819 FAAP24Q9BTP7 215 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 RAB18Q9NP72 206 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 PLEKHJ1Q9NW61 149 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 GHRLQ9UBU3 117 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 TRBV6-7A0A0A0MS04 114 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 A0A1B0GW55 424 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 FIGNL2A6NMB9 653 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 F8VVB4 439 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 F8VWA3 439 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 SFTPBP07988 381 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 DUX4L2P0CJ85 424 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 DUX4L3P0CJ86 424 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 DUX4L4P0CJ87 422 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 DUX4L5P0CJ88 424 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 DUX4L6P0CJ89 424 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 DUX4L7P0CJ90 424 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 ZNF32P17041 273 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 CRYGSP22914 178 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 CPT2P23786 658 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 TAS2R46P59540 309 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 MRPS34P82930 218 aaKnown RBP8.75□□□□□ -1.01
LRRC28-216ENST00000559819 SRSF3P84103 164 aaKnown RBP8.75□□□□□ -1.01
LRRC28-216ENST00000559819 LPAL2Q16609 132 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 WIPI1Q5MNZ9 446 aaPredicted RBP8.75□□□□□ -1.01
LRRC28-216ENST00000559819 FAM27BQ5VT28 67 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 PLXDC2Q6UX71 529 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 GGNQ86UU5 652 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 WDR5BQ86VZ2 330 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 BATF2Q8N1L9 274 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 POC1AQ8NBT0 407 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 LHFPL5Q8TAF8 219 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 Q96M66 194 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 CDX2Q99626 313 aaPredicted RBP8.75□□□□□ -1.01
LRRC28-216ENST00000559819 LDAHQ9H6V9 325 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 C12orf4Q9NQ89 552 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 OR2S2Q9NQN1 319 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.75□□□□□ -1.01
LRRC28-216ENST00000559819 DUX4Q9UBX2 424 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 MYO7BQ6PIF6 2116 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 TMEM265A0A087WTH1 108 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 FAM74A7A6NL05 159 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 SYNGR3O43761 229 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 MTRF1O75570 445 aaKnown RBP8.75□□□□□ -1.01
LRRC28-216ENST00000559819 LCATP04180 440 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 TDGF1P13385 188 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 OPRM1P35372 400 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 CARD18P57730 90 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 PDCD1Q15116 288 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 FAM189A2Q15884 450 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 FAM74A3Q4VXF1 159 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 CCDC157Q569K6 752 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 PRSS54Q6PEW0 395 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 PPP1R32Q7Z5V6 425 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 EMG1Q92979 244 aaKnown RBP8.75□□□□□ -1.01
LRRC28-216ENST00000559819 WNT2BQ93097 391 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 LIME1Q9H400 295 aa8.75□□□□□ -1.01
LRRC28-216ENST00000559819 FAM221AA4D161 298 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 PINLYPA6NC86 204 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 SERPINE3A8MV23 424 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 DNASE2O00115 360 aaPredicted RBP8.74□□□□□ -1.01
LRRC28-216ENST00000559819 BET1O15155 118 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 TRAPPC6AO75865 159 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 P04436 131 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 TPT1P13693 172 aaKnown RBP8.74□□□□□ -1.01
LRRC28-216ENST00000559819 CYCSP99999 105 aaKnown RBP8.74□□□□□ -1.01
LRRC28-216ENST00000559819 RAB35Q15286 201 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 TRIM61Q5EBN2 209 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 OR1F12Q8NHA8 337 aa8.74□□□□□ -1.01
LRRC28-216ENST00000559819 C2orf50Q96LR7 162 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms