RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 NUP50Q9UKX7 468 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 SLC22A13Q9Y226 551 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 INSIG2Q9Y5U4 225 aa3.65□□□□□ -1.83
SNX1-205ENST00000559339 CHD3Q12873 2000 aaKnown RBP3.65□□□□□ -1.83
SNX1-205ENST00000559339 IGHV3OR15-7A0A075B7D8 119 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 hCG_1809904A0A1W2PP81 198 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 A0A1W2PPE2 198 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 A0A1W2PPH5 198 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 FAM230AA0A1W2PPH8 454 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 A0A1W2PR64 198 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 A0A1W2PRV1 198 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 TMEM212A6NML5 194 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 OR2AT4A6NND4 320 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 PRR32B1ATL7 298 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 SRRM5B3KS81 715 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 ZNF879B4DU55 563 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 TRIM77I1YAP6 450 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 SLC1A7O00341 560 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 P2RY10O00398 339 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 MAGEB3O15480 346 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 SRSF10O75494 262 aaKnown RBP3.64□□□□□ -1.83
SNX1-205ENST00000559339 RHBDL1O75783 438 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 TOX4O94842 621 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 NXPH2O95156 264 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 CYB5AP00167 134 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 AVPP01185 164 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 ISG15P05161 165 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 CCDC159P0C7I6 412 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 DBTP11182 482 aaKnown RBP3.64□□□□□ -1.83
SNX1-205ENST00000559339 ZNF20P17024 532 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 CCL1P22362 96 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 PRKACBP22694 351 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 DCKP27707 260 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 CD80P33681 288 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 RBMXP38159 391 aaKnown RBP3.64□□□□□ -1.83
SNX1-205ENST00000559339 GABRA2P47869 451 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 CCR9P51686 369 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 FUT6P51993 359 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 GBX2P52951 348 aaPredicted RBP3.64□□□□□ -1.83
SNX1-205ENST00000559339 MTCP1P56278 107 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 OR12D2P58182 307 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 HILS1P60008 231 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 IL13RA1P78552 427 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 ZNF85Q03923 595 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 ZNF91Q05481 1191 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 GABPB1Q06547 395 aaPredicted RBP3.64□□□□□ -1.83
SNX1-205ENST00000559339 PAX8Q06710 450 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 HNRNPA0Q13151 305 aaKnown RBP3.64□□□□□ -1.83
SNX1-205ENST00000559339 IKZF1Q13422 519 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 IL18R1Q13478 541 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 BLMHQ13867 455 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 SMIM21Q3B7S5 101 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 TP53I3Q53FA7 332 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 WDR38Q5JTN6 314 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 ATPAF1Q5TC12 328 aaPredicted RBP3.64□□□□□ -1.83
SNX1-205ENST00000559339 GPR157Q5UAW9 335 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 LPCAT4Q643R3 524 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 TMEM42Q69YG0 159 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 LYPD2Q6UXB3 125 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 TMPRSS11AQ6ZMR5 421 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 ZNF841Q6ZN19 808 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 C1orf229Q6ZS94 237 aaPredicted RBP3.64□□□□□ -1.83
SNX1-205ENST00000559339 BTN2A1Q7KYR7 527 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 SSX6Q7RTT6 188 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 WDR86Q86TI4 376 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 LHFPL3Q86UP9 236 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 CATSPERDQ86XM0 798 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 SERPINA12Q8IW75 414 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 CMTM4Q8IZR5 234 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 C8orf59Q8N0T1 100 aaPredicted RBP3.64□□□□□ -1.83
SNX1-205ENST00000559339 SYS1Q8N2H4 156 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 DHRSXQ8N5I4 330 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 ZNF676Q8N7Q3 588 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 OR5T2Q8NGG2 359 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 OR5D14Q8NGL3 314 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 OR14K1Q8NGZ2 314 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 OR2G2Q8NGZ5 317 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 OR5AK2Q8NH90 309 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 TBC1D15Q8TC07 691 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 ZFAND2BQ8WV99 257 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 HPSE2Q8WWQ2 592 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 C22orf15Q8WYQ4 148 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 ST8SIA4Q92187 359 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 AQP3Q92482 292 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 PPP1R14AQ96A00 147 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 SPSB1Q96BD6 273 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 LGALS12Q96DT0 336 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 BORCS8Q96FH0 119 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 CPNE2Q96FN4 548 aaPredicted RBP3.64□□□□□ -1.83
SNX1-205ENST00000559339 C4orf36Q96KX1 117 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 DMRTB1Q96MA1 342 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 CCL13Q99616 98 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 MDFIQ99750 246 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 PCGF1Q9BSM1 259 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 ALG8Q9BVK2 526 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 CHST5Q9GZS9 411 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 VCX3BQ9H321 246 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 PPP1R3EQ9H7J1 279 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 DCLRE1BQ9H816 532 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 CNTD2Q9H8S5 307 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms