RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 BIKQ13323 160 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 TSC22D1Q15714 1073 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 NKAIN1Q4KMZ8 207 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 TMEM69Q5SWH9 247 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 AADACL4Q5VUY2 407 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 MLIPQ5VWP3 458 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 OR2T5Q6IEZ7 315 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 OPN5Q6U736 354 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 SLC35D2Q76EJ3 337 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 NDUFAF7Q7L592 441 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 OR2W3Q7Z3T1 314 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 DAW1Q8N136 415 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 OR2Z1Q8NG97 314 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 OR10Z1Q8NGY1 313 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 OR2T29Q8NH02 315 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 MITD1Q8WV92 249 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 GHSRQ92847 366 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 LRRC39Q96DD0 335 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 UBE2E2Q96LR5 201 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 RDH12Q96NR8 316 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 OR4K3Q96R72 315 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 MARVELD1Q9BSK0 173 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 NUDT9Q9BW91 350 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 SFXN3Q9BWM7 321 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 NAA50Q9GZZ1 169 aaKnown RBP1.42□□□□□ -2.18
VPS13C-207ENST00000558919 STMN4Q9H169 189 aaPredicted RBP1.42□□□□□ -2.18
VPS13C-207ENST00000558919 OR2AG1Q9H205 316 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 ADA2Q9NZK5 511 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 CRCT1Q9UGL9 99 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 CES1P1Q9UKY3 287 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 STK38LQ9Y2H1 464 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 OR51B2Q9Y5P1 312 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 TNIKQ9UKE5 1360 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 CACNA1DQ01668 2161 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 A0A0J9YYE9 177 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 A0A1W2PPV4 95 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.41□□□□□ -2.18
VPS13C-207ENST00000558919 SLC19A2O60779 497 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 UPK1BO75841 260 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 LCA5LO95447 670 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 TTC4O95801 387 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 TRBC1P01850 177 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 HSPD1P10809 573 aaKnown RBP1.41□□□□□ -2.18
VPS13C-207ENST00000558919 ZNF35P13682 527 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 CXCR1P25024 350 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 TGFBR2P37173 567 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 CSKP41240 450 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 GZMMP51124 257 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 CMC4P56277 68 aaPredicted RBP1.41□□□□□ -2.18
VPS13C-207ENST00000558919 HNRNPA1L2Q32P51 320 aaKnown RBP1.41□□□□□ -2.18
VPS13C-207ENST00000558919 LUZP6Q538Z0 58 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 FBXO48Q5FWF7 155 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 MFSD14CQ5VZR4 134 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 TMEM236Q5W0B7 351 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 STEAP4Q687X5 459 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 SLC30A8Q8IWU4 369 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 DRAM1Q8N682 238 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 OTUD6BQ8N6M0 293 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 TRIML2Q8N7C3 387 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 FBXO36Q8NEA4 188 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 SLC26A10Q8NG04 563 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 DCAKDQ8WVC6 231 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 CDS1Q92903 461 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 SMARCD1Q96GM5 515 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 C18orf15Q96N68 181 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 PKMYT1Q99640 499 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 OR51B5Q9H339 312 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 ARMC7Q9H6L4 198 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 PLEKHF2Q9H8W4 249 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 RBFOX1Q9NWB1 397 aaKnown RBP1.41□□□□□ -2.18
VPS13C-207ENST00000558919 IFNKQ9P0W0 207 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 BZW2Q9Y6E2 419 aaKnown RBP1.41□□□□□ -2.18
VPS13C-207ENST00000558919 SBNO1A3KN83 1393 aa1.41□□□□□ -2.18
VPS13C-207ENST00000558919 KIF27Q86VH2 1401 aa1.4□□□□□ -2.18
VPS13C-207ENST00000558919 DYSFO75923 2080 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 JCADQ9P266 1359 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 GOLGA6L4A6NEF3 574 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 CENPBD1B2RD01 187 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 M0QX08 132 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 M0R1X1 148 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 MYL12BO14950 172 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 NEMFO60524 1076 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 SCO1O75880 301 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 GCGP01275 180 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 IGLV2-8P01709 118 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 IVLP07476 585 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 HOXB8P17481 243 aaPredicted RBP1.4□□□□□ -2.19
VPS13C-207ENST00000558919 NELFEP18615 380 aaKnown RBP1.4□□□□□ -2.19
VPS13C-207ENST00000558919 IVDP26440 423 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 ARL2P36404 184 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 PSMC5P62195 406 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 ELF3P78545 371 aaPredicted RBP1.4□□□□□ -2.19
VPS13C-207ENST00000558919 C2orf54Q08AI8 447 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 INCA1Q0VD86 236 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 BTN1A1Q13410 526 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 SP6Q3SY56 376 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 C6orf99Q4VX62 202 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 SLC25A25Q6KCM7 469 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 C16orf87Q6PH81 154 aa1.4□□□□□ -2.19
VPS13C-207ENST00000558919 Q6ZSR6 202 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms