RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 ZNRF1Q8ND25 227 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 ZNF671Q8TAW3 534 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 OR51E1Q8TCB6 317 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 ITFG2Q969R8 447 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 UTP4Q969X6 686 aaKnown RBP9.43□□□□□ -0.9
CASC4-205ENST00000558735 NRBF2Q96F24 287 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 DUS3LQ96G46 650 aaKnown RBP9.43□□□□□ -0.9
CASC4-205ENST00000558735 PBOV1Q9GZY1 135 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 DPAGT1Q9H3H5 408 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 YY1AP1Q9H869 796 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 NLKQ9UBE8 527 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 COPS3Q9UNS2 423 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 NPFFO15130 113 aa9.42□□□□□ -0.9
CASC4-205ENST00000558735 MAGEB4O15481 346 aaPredicted RBP9.42□□□□□ -0.9
CASC4-205ENST00000558735 PRKYO43930 277 aa9.42□□□□□ -0.9
CASC4-205ENST00000558735 ZNF254O75437 659 aa9.42□□□□□ -0.9
CASC4-205ENST00000558735 SRSF10O75494 262 aaKnown RBP9.42□□□□□ -0.9
CASC4-205ENST00000558735 CLPXO76031 633 aa9.42□□□□□ -0.9
CASC4-205ENST00000558735 FBP1P09467 338 aa9.42□□□□□ -0.9
CASC4-205ENST00000558735 ATP6V1B1P15313 513 aa9.42□□□□□ -0.9
CASC4-205ENST00000558735 NDUFB7P17568 137 aa9.42□□□□□ -0.9
CASC4-205ENST00000558735 EEF1B2P24534 225 aaKnown RBP9.42□□□□□ -0.9
CASC4-205ENST00000558735 EPHA2P29317 976 aa9.42□□□□□ -0.9
CASC4-205ENST00000558735 UBE2E1P51965 193 aa9.42□□□□□ -0.9
CASC4-205ENST00000558735 PROK1P58294 105 aa9.42□□□□□ -0.9
CASC4-205ENST00000558735 GUCA2AQ02747 115 aa9.42□□□□□ -0.9
CASC4-205ENST00000558735 RIPPLY1Q0D2K3 151 aa9.42□□□□□ -0.9
CASC4-205ENST00000558735 DNAL1Q4LDG9 190 aa9.42□□□□□ -0.9
CASC4-205ENST00000558735 ASPHD2Q6ICH7 369 aa9.42□□□□□ -0.9
CASC4-205ENST00000558735 Q6ZSV7 163 aa9.42□□□□□ -0.9
CASC4-205ENST00000558735 FAM81AQ8TBF8 368 aa9.42□□□□□ -0.9
CASC4-205ENST00000558735 AQP3Q92482 292 aa9.42□□□□□ -0.9
CASC4-205ENST00000558735 OR8B4Q96RC9 309 aa9.42□□□□□ -0.9
CASC4-205ENST00000558735 APOL4Q9BPW4 351 aa9.42□□□□□ -0.9
CASC4-205ENST00000558735 RBM4BQ9BQ04 359 aaKnown RBP9.42□□□□□ -0.9
CASC4-205ENST00000558735 TEX12Q9BXU0 123 aa9.42□□□□□ -0.9
CASC4-205ENST00000558735 MROQ9BYG7 248 aa9.42□□□□□ -0.9
CASC4-205ENST00000558735 ELL3Q9HB65 397 aaPredicted RBP9.42□□□□□ -0.9
CASC4-205ENST00000558735 GPR84Q9NQS5 396 aa9.42□□□□□ -0.9
CASC4-205ENST00000558735 PAPOLBQ9NRJ5 636 aaKnown RBP9.42□□□□□ -0.9
CASC4-205ENST00000558735 ZNRD1Q9P1U0 126 aa9.42□□□□□ -0.9
CASC4-205ENST00000558735 ZNF222Q9UK12 451 aa9.42□□□□□ -0.9
CASC4-205ENST00000558735 CAB39Q9Y376 341 aaPredicted RBP9.42□□□□□ -0.9
CASC4-205ENST00000558735 RYR3Q15413 4870 aa9.41□□□□□ -0.9
CASC4-205ENST00000558735 NKX6-3A6NJ46 265 aa9.41□□□□□ -0.9
CASC4-205ENST00000558735 M0R1W7 72 aa9.41□□□□□ -0.9
CASC4-205ENST00000558735 GSC2O15499 205 aa9.41□□□□□ -0.9
CASC4-205ENST00000558735 DNAJC8O75937 253 aaPredicted RBP9.41□□□□□ -0.9
CASC4-205ENST00000558735 TTRP02766 147 aa9.41□□□□□ -0.9
CASC4-205ENST00000558735 FAHP16930 419 aa9.41□□□□□ -0.9
CASC4-205ENST00000558735 RIDAP52758 137 aaKnown RBP9.41□□□□□ -0.9
CASC4-205ENST00000558735 HCP5Q6MZN7 132 aa9.41□□□□□ -0.9
CASC4-205ENST00000558735 HAGHLQ6PII5 290 aaPredicted RBP9.41□□□□□ -0.9
CASC4-205ENST00000558735 BRICD5Q6PL45 260 aa9.41□□□□□ -0.9
CASC4-205ENST00000558735 GDPGP1Q6ZNW5 385 aa9.41□□□□□ -0.9
CASC4-205ENST00000558735 MEPCEQ7L2J0 689 aaKnown RBP9.41□□□□□ -0.9
CASC4-205ENST00000558735 CD177Q8N6Q3 437 aa9.41□□□□□ -0.9
CASC4-205ENST00000558735 ASB17Q8WXJ9 295 aa9.41□□□□□ -0.9
CASC4-205ENST00000558735 DNAJC9Q8WXX5 260 aa9.41□□□□□ -0.9
CASC4-205ENST00000558735 SDSLQ96GA7 329 aa9.41□□□□□ -0.9
CASC4-205ENST00000558735 AJUBAQ96IF1 538 aa9.41□□□□□ -0.9
CASC4-205ENST00000558735 CADM1Q9BY67 442 aaKnown RBP9.41□□□□□ -0.9
CASC4-205ENST00000558735 TTTY10Q9BZA0 68 aa9.41□□□□□ -0.9
CASC4-205ENST00000558735 C16orf95Q9H693 158 aa9.41□□□□□ -0.9
CASC4-205ENST00000558735 METTL8Q9H825 291 aaKnown RBP9.41□□□□□ -0.9
CASC4-205ENST00000558735 NUFIP1Q9UHK0 495 aaKnown RBP9.41□□□□□ -0.9
CASC4-205ENST00000558735 PIGLQ9Y2B2 252 aa9.41□□□□□ -0.9
CASC4-205ENST00000558735 TMEM14AQ9Y6G1 99 aa9.41□□□□□ -0.9
CASC4-205ENST00000558735 A0A1B0GTI1 187 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 MEIOCA2RUB1 952 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 OR5B21A6NL26 309 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 RFPL4AA6NLU0 287 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 RFPL4AL1F8VTS6 287 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 SYNGR1O43759 233 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 MITFO75030 526 aaPredicted RBP9.4□□□□□ -0.9
CASC4-205ENST00000558735 MTRF1O75570 445 aaKnown RBP9.4□□□□□ -0.9
CASC4-205ENST00000558735 TSPAN9O75954 239 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 ALX3O95076 343 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 NRASP01111 189 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 SAA4P35542 130 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 ESRRGP62508 458 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 MFGE8Q08431 387 aaPredicted RBP9.4□□□□□ -0.9
CASC4-205ENST00000558735 ACSM1Q08AH1 577 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 ZBTB37Q5TC79 503 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 AADACL4Q5VUY2 407 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 ACP7Q6ZNF0 438 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 THAP5Q7Z6K1 395 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 C11orf42Q8N5U0 333 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 TCEANCQ8N8B7 351 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 OR5K1Q8NHB7 308 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 BCAS4Q8TDM0 211 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 C17orf50Q8WW18 174 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 LRTOMTQ8WZ04 291 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 ZNF488Q96MN9 340 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 FAM53CQ9NYF3 392 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 RASL12Q9NYN1 266 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 VPREB3Q9UKI3 123 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 IKZF2Q9UKS7 526 aa9.4□□□□□ -0.9
CASC4-205ENST00000558735 A0A1W2PQ09 198 aa9.39□□□□□ -0.91
CASC4-205ENST00000558735 A6NIN4 97 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms