RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 RPL15P61313 204 aaKnown RBP12.73□□□□□ -0.37
TPM1-211ENST00000558314 RIPPLY1Q0D2K3 151 aa12.73□□□□□ -0.37
TPM1-211ENST00000558314 BCDIN3DQ7Z5W3 292 aaKnown RBP12.73□□□□□ -0.37
TPM1-211ENST00000558314 ZNF671Q8TAW3 534 aa12.73□□□□□ -0.37
TPM1-211ENST00000558314 FAM110DQ8TAY7 271 aaPredicted RBP12.73□□□□□ -0.37
TPM1-211ENST00000558314 NPRL2Q8WTW4 380 aa12.73□□□□□ -0.37
TPM1-211ENST00000558314 RBM4BQ9BQ04 359 aaKnown RBP12.73□□□□□ -0.37
TPM1-211ENST00000558314 YIPF3Q9GZM5 350 aa12.73□□□□□ -0.37
TPM1-211ENST00000558314 DNTTIP1Q9H147 329 aa12.73□□□□□ -0.37
TPM1-211ENST00000558314 PAPOLBQ9NRJ5 636 aaKnown RBP12.73□□□□□ -0.37
TPM1-211ENST00000558314 FAM206AQ9NX38 181 aa12.73□□□□□ -0.37
TPM1-211ENST00000558314 COPS3Q9UNS2 423 aa12.73□□□□□ -0.37
TPM1-211ENST00000558314 IGKV1D-17A0A075B6S4 117 aa12.72□□□□□ -0.37
TPM1-211ENST00000558314 PRR32B1ATL7 298 aa12.72□□□□□ -0.37
TPM1-211ENST00000558314 MAGEB4O15481 346 aaPredicted RBP12.72□□□□□ -0.37
TPM1-211ENST00000558314 PSG2P11465 335 aa12.72□□□□□ -0.37
TPM1-211ENST00000558314 PAX6P26367 422 aa12.72□□□□□ -0.37
TPM1-211ENST00000558314 DCTDP32321 178 aa12.72□□□□□ -0.37
TPM1-211ENST00000558314 CEBPDP49716 269 aaPredicted RBP12.72□□□□□ -0.37
TPM1-211ENST00000558314 RIDAP52758 137 aaKnown RBP12.72□□□□□ -0.37
TPM1-211ENST00000558314 CRISP1P54107 249 aa12.72□□□□□ -0.37
TPM1-211ENST00000558314 EGR3Q06889 387 aa12.72□□□□□ -0.37
TPM1-211ENST00000558314 MFGE8Q08431 387 aaPredicted RBP12.72□□□□□ -0.37
TPM1-211ENST00000558314 ZNF829Q3KNS6 432 aaPredicted RBP12.72□□□□□ -0.37
TPM1-211ENST00000558314 CEACAM21Q3KPI0 293 aa12.72□□□□□ -0.37
TPM1-211ENST00000558314 NCR3LG1Q68D85 454 aa12.72□□□□□ -0.37
TPM1-211ENST00000558314 ASPHD2Q6ICH7 369 aa12.72□□□□□ -0.37
TPM1-211ENST00000558314 PLEKHG7Q6ZR37 379 aa12.72□□□□□ -0.37
TPM1-211ENST00000558314 ZSCAN4Q8NAM6 433 aaPredicted RBP12.72□□□□□ -0.37
TPM1-211ENST00000558314 C8orf46Q8TAG6 207 aa12.72□□□□□ -0.37
TPM1-211ENST00000558314 C17orf50Q8WW18 174 aa12.72□□□□□ -0.37
TPM1-211ENST00000558314 RORBQ92753 470 aa12.72□□□□□ -0.37
TPM1-211ENST00000558314 TEAD3Q99594 435 aa12.72□□□□□ -0.37
TPM1-211ENST00000558314 C1orf21Q9H246 121 aa12.72□□□□□ -0.37
TPM1-211ENST00000558314 OR51I2Q9H344 312 aa12.72□□□□□ -0.37
TPM1-211ENST00000558314 METTL8Q9H825 291 aaKnown RBP12.72□□□□□ -0.37
TPM1-211ENST00000558314 SLC25A19Q9HC21 320 aa12.72□□□□□ -0.37
TPM1-211ENST00000558314 GPR173Q9NS66 373 aa12.72□□□□□ -0.37
TPM1-211ENST00000558314 H2AFY2Q9P0M6 372 aaPredicted RBP12.72□□□□□ -0.37
TPM1-211ENST00000558314 DNAJB9Q9UBS3 223 aa12.72□□□□□ -0.37
TPM1-211ENST00000558314 OR14J1Q9UGF5 321 aa12.72□□□□□ -0.37
TPM1-211ENST00000558314 CCDC182A6NF36 153 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 A6NIN4 97 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 H3BSH0 61 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 H3BUX3 64 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 M0R1W7 72 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 COX7A1P24310 79 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 UBE2E1P51965 193 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 CAV3P56539 151 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 PROK1P58294 105 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 ODF4Q2M2E3 257 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 FAM76BQ5HYJ3 339 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 ZNF684Q5T5D7 378 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 HIST2H2BDQ6DRA6 164 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 METAP1DQ6UB28 335 aaPredicted RBP12.71□□□□□ -0.37
TPM1-211ENST00000558314 ASRGL1Q7L266 308 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 TRPM8Q7Z2W7 1104 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 C1QL4Q86Z23 238 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 OR4M1Q8NGD0 313 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 OR51G2Q8NGK0 314 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 AQP3Q92482 292 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 TNFRSF14Q92956 283 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 OR8B4Q96RC9 309 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 CNN2Q99439 309 aaKnown RBP12.71□□□□□ -0.37
TPM1-211ENST00000558314 APOL4Q9BPW4 351 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 MMP27Q9H306 513 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 C19orf12Q9NSK7 152 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 ENPP5Q9UJA9 477 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 SF3B6Q9Y3B4 125 aaKnown RBP12.71□□□□□ -0.37
TPM1-211ENST00000558314 MAB21L2Q9Y586 359 aa12.71□□□□□ -0.37
TPM1-211ENST00000558314 A0A0U1RQV5 110 aa12.7□□□□□ -0.38
TPM1-211ENST00000558314 OR5B21A6NL26 309 aa12.7□□□□□ -0.38
TPM1-211ENST00000558314 RFPL4AA6NLU0 287 aa12.7□□□□□ -0.38
TPM1-211ENST00000558314 LOC110117498-PIK3R3F6TDL0 507 aa12.7□□□□□ -0.38
TPM1-211ENST00000558314 RFPL4AL1F8VTS6 287 aa12.7□□□□□ -0.38
TPM1-211ENST00000558314 SYNGR1O43759 233 aa12.7□□□□□ -0.38
TPM1-211ENST00000558314 PRKYO43930 277 aa12.7□□□□□ -0.38
TPM1-211ENST00000558314 INMTO95050 263 aa12.7□□□□□ -0.38
TPM1-211ENST00000558314 TSPAN15O95858 294 aa12.7□□□□□ -0.38
TPM1-211ENST00000558314 NRASP01111 189 aa12.7□□□□□ -0.38
TPM1-211ENST00000558314 PIPP12273 146 aaPredicted RBP12.7□□□□□ -0.38
TPM1-211ENST00000558314 HAAOP46952 286 aa12.7□□□□□ -0.38
TPM1-211ENST00000558314 DNAL1Q4LDG9 190 aa12.7□□□□□ -0.38
TPM1-211ENST00000558314 BCL2L15Q5TBC7 163 aa12.7□□□□□ -0.38
TPM1-211ENST00000558314 SLC35F2Q8IXU6 374 aa12.7□□□□□ -0.38
TPM1-211ENST00000558314 MKXQ8IYA7 352 aa12.7□□□□□ -0.38
TPM1-211ENST00000558314 ZNF679Q8IYX0 411 aa12.7□□□□□ -0.38
TPM1-211ENST00000558314 C11orf44Q8N8P7 122 aa12.7□□□□□ -0.38
TPM1-211ENST00000558314 OR5A2Q8NGI9 324 aa12.7□□□□□ -0.38
TPM1-211ENST00000558314 OR5R1Q8NH85 324 aa12.7□□□□□ -0.38
TPM1-211ENST00000558314 ASB17Q8WXJ9 295 aa12.7□□□□□ -0.38
TPM1-211ENST00000558314 SSX3Q99909 188 aa12.7□□□□□ -0.38
TPM1-211ENST00000558314 SIGLEC9Q9Y336 463 aa12.7□□□□□ -0.38
TPM1-211ENST00000558314 TMEM14AQ9Y6G1 99 aa12.7□□□□□ -0.38
TPM1-211ENST00000558314 WNK1Q9H4A3 2382 aa12.69□□□□□ -0.38
TPM1-211ENST00000558314 MEX3AA1L020 520 aaKnown RBP12.69□□□□□ -0.38
TPM1-211ENST00000558314 ACOD1A6NK06 481 aa12.69□□□□□ -0.38
TPM1-211ENST00000558314 SLC22A31A6NKX4 558 aa12.69□□□□□ -0.38
TPM1-211ENST00000558314 SLC1A7O00341 560 aa12.69□□□□□ -0.38
TPM1-211ENST00000558314 MITFO75030 526 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms