RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 UGT1A7Q9HAW7 530 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 UGT1A8Q9HAW9 530 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 TMEM27Q9HBJ8 222 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 TMBIM4Q9HC24 238 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 CTPS2Q9NRF8 586 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.99□□□□□ -2.09
SPG11-206ENST00000558093 CLN6Q9NWW5 311 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 SMPXQ9UHP9 88 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 SLC17A4Q9Y2C5 497 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 RCL1Q9Y2P8 373 aaKnown RBP1.99□□□□□ -2.09
SPG11-206ENST00000558093 ACOT9Q9Y305 439 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 MYH2Q9UKX2 1941 aa1.99□□□□□ -2.09
SPG11-206ENST00000558093 CCNB3Q8WWL7 1395 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 PCF11O94913 1555 aaKnown RBP1.98□□□□□ -2.09
SPG11-206ENST00000558093 PCM1Q15154 2024 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 MROH7Q68CQ1 1323 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 NRCAMQ92823 1304 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 USP42Q9H9J4 1324 aaKnown RBP1.98□□□□□ -2.09
SPG11-206ENST00000558093 ZNF532Q9HCE3 1301 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 TRAV8-7A0A075B6U6 113 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 KIR2DL5BA0A0G2JN68 375 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 KIR2DL5BA0A0G2JPC4 375 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 A0A0G2JRQ6 117 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 FTCDNL1E5RQL4 147 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 F8W036 122 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 H7C0C1 242 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 M0QZK8 103 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 CXCR6O00574 342 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 UBDO15205 165 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 FGF16O43320 207 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 KLRC4O43908 158 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 FAM189A1O60320 539 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 FADS1O60427 444 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 HPGDSO60760 199 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 FOXH1O75593 365 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 GLSO94925 669 aaPredicted RBP1.98□□□□□ -2.09
SPG11-206ENST00000558093 C1orf105O95561 183 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 C2P06681 752 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 UGT2B7P16662 529 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 RPS12P25398 132 aaKnown RBP1.98□□□□□ -2.09
SPG11-206ENST00000558093 GNRHRP30968 328 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 SSTR5P35346 364 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 CEACAM6P40199 344 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 GLP1RP43220 463 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 RPL5P46777 297 aaKnown RBP1.98□□□□□ -2.09
SPG11-206ENST00000558093 QARSP47897 775 aaKnown RBP1.98□□□□□ -2.09
SPG11-206ENST00000558093 GSSP48637 474 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 DNASE1L1P49184 302 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 ACOT2P49753 483 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 AP2S1P53680 142 aaPredicted RBP1.98□□□□□ -2.09
SPG11-206ENST00000558093 OR10A3P58181 314 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 ESRRGP62508 458 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 ACVR1Q04771 509 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 KRR1Q13601 381 aaKnown RBP1.98□□□□□ -2.09
SPG11-206ENST00000558093 NRF1Q16656 503 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 TMEM176BQ3YBM2 270 aaPredicted RBP1.98□□□□□ -2.09
SPG11-206ENST00000558093 CARD16Q5EG05 197 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 ACTL10Q5JWF8 245 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 TPRG1LQ5T0D9 272 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 CASC10Q5T4H9 136 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 OGFRL1Q5TC84 451 aaPredicted RBP1.98□□□□□ -2.09
SPG11-206ENST00000558093 NIPAL1Q6NVV3 410 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 FAM131AQ6UXB0 335 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 CASP12Q6UXS9 341 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 CYHR1Q6ZMK1 362 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 TMEM144Q7Z5S9 345 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 TMED4Q7Z7H5 227 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 PHF13Q86YI8 300 aaPredicted RBP1.98□□□□□ -2.09
SPG11-206ENST00000558093 RIMKLAQ8IXN7 391 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 BLIDQ8IZY5 108 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 KIR2DL5AQ8N109 375 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 LGI3Q8N145 548 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 SVOPLQ8N434 492 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 MS4A15Q8N5U1 240 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 OR51S1Q8NGJ8 323 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 OR10X1Q8NGY0 326 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 OR6K3Q8NGY3 331 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 OR5B3Q8NH48 314 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 OR56B4Q8NH76 319 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 ITFG1Q8TB96 612 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 TMEM158Q8WZ71 300 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 OR8D1Q8WZ84 308 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 RORBQ92753 470 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 UBE2E3Q969T4 207 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 RNF185Q96GF1 192 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 RILPQ96NA2 401 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 OR2V2Q96R30 315 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 CLCC1Q96S66 551 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 PFDN5Q99471 154 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 HIST1H4GQ99525 98 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 HDHD3Q9BSH5 251 aaPredicted RBP1.98□□□□□ -2.09
SPG11-206ENST00000558093 TMEM208Q9BTX3 173 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 DDA1Q9BW61 102 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 CDCA4Q9BXL8 241 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 ARL6Q9H0F7 186 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 TMEM38AQ9H6F2 299 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 ARMC7Q9H6L4 198 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 RDH14Q9HBH5 336 aa1.98□□□□□ -2.09
SPG11-206ENST00000558093 EML4Q9HC35 981 aaKnown RBP1.98□□□□□ -2.09
SPG11-206ENST00000558093 FGF20Q9NP95 211 aaPredicted RBP1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms