RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 CEP19Q96LK0 163 aa14.36□□□□□ -0.11
SNX1-203ENST00000558040 NKX3-1Q99801 234 aaPredicted RBP14.36□□□□□ -0.11
SNX1-203ENST00000558040 DYNLRB1Q9NP97 96 aa14.36□□□□□ -0.11
SNX1-203ENST00000558040 SPTBN1Q01082 2364 aaKnown RBP14.36□□□□□ -0.11
SNX1-203ENST00000558040 A0A0B4J203 849 aa14.35□□□□□ -0.11
SNX1-203ENST00000558040 HS3ST1O14792 307 aa14.35□□□□□ -0.11
SNX1-203ENST00000558040 PAHP00439 452 aa14.35□□□□□ -0.11
SNX1-203ENST00000558040 COX6B1P14854 86 aa14.35□□□□□ -0.11
SNX1-203ENST00000558040 CD200P41217 278 aa14.35□□□□□ -0.11
SNX1-203ENST00000558040 ALDH3B1P43353 468 aa14.35□□□□□ -0.11
SNX1-203ENST00000558040 SRP9P49458 86 aaKnown RBP14.35□□□□□ -0.11
SNX1-203ENST00000558040 ZP1P60852 638 aa14.35□□□□□ -0.11
SNX1-203ENST00000558040 SNRPD2P62316 118 aaKnown RBP14.35□□□□□ -0.11
SNX1-203ENST00000558040 PDZK1IP1Q13113 114 aa14.35□□□□□ -0.11
SNX1-203ENST00000558040 CRIP3Q6Q6R5 217 aa14.35□□□□□ -0.11
SNX1-203ENST00000558040 GLIPR1L1Q6UWM5 242 aa14.35□□□□□ -0.11
SNX1-203ENST00000558040 SAXO1Q8IYX7 474 aa14.35□□□□□ -0.11
SNX1-203ENST00000558040 MUC15Q8N387 334 aa14.35□□□□□ -0.11
SNX1-203ENST00000558040 SAMD12Q8N8I0 201 aa14.35□□□□□ -0.11
SNX1-203ENST00000558040 ZSCAN4Q8NAM6 433 aaPredicted RBP14.35□□□□□ -0.11
SNX1-203ENST00000558040 OR6Q1Q8NGQ2 317 aa14.35□□□□□ -0.11
SNX1-203ENST00000558040 TBC1D15Q8TC07 691 aa14.35□□□□□ -0.11
SNX1-203ENST00000558040 CMTM3Q96MX0 182 aa14.35□□□□□ -0.11
SNX1-203ENST00000558040 PKIBQ9C010 78 aa14.35□□□□□ -0.11
SNX1-203ENST00000558040 FGF23Q9GZV9 251 aaPredicted RBP14.35□□□□□ -0.11
SNX1-203ENST00000558040 OR51I2Q9H344 312 aa14.35□□□□□ -0.11
SNX1-203ENST00000558040 PCDHB16Q9NRJ7 776 aa14.35□□□□□ -0.11
SNX1-203ENST00000558040 OR5V1Q9UGF6 321 aa14.35□□□□□ -0.11
SNX1-203ENST00000558040 RELNP78509 3460 aa14.35□□□□□ -0.11
SNX1-203ENST00000558040 F5H5P2 479 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 J3QT63 122 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 CTDSP2O14595 271 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 SPRY3O43610 288 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 CLDN1O95832 211 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 PLATP00750 562 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 ADH4P08319 380 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 NAT2P11245 290 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 GPR176Q14439 515 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 C2orf76Q3KRA6 126 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 FAM76BQ5HYJ3 339 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 UBE2NLQ5JXB2 153 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 AGAP6Q5VW22 663 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 HAGHLQ6PII5 290 aaPredicted RBP14.34□□□□□ -0.11
SNX1-203ENST00000558040 OR2W3Q7Z3T1 314 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 RNF144BQ7Z419 303 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 MKXQ8IYA7 352 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 CELF2-AS1Q8N7Q2 184 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 ZNF611Q8N823 705 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 PXT1Q8NFP0 134 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 GTF3AQ92664 365 aaKnown RBP14.34□□□□□ -0.11
SNX1-203ENST00000558040 TSC22D3Q99576 134 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 CST11Q9H112 138 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 METTL9Q9H1A3 318 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 MS4A5Q9H3V2 200 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 ELL3Q9HB65 397 aaPredicted RBP14.34□□□□□ -0.11
SNX1-203ENST00000558040 ING4Q9UNL4 249 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 POLDIP2Q9Y2S7 368 aa14.34□□□□□ -0.11
SNX1-203ENST00000558040 A1L4Q6 167 aa14.33□□□□□ -0.12
SNX1-203ENST00000558040 C17orf100A8MU93 164 aa14.33□□□□□ -0.12
SNX1-203ENST00000558040 SPRY1O43609 319 aaPredicted RBP14.33□□□□□ -0.12
SNX1-203ENST00000558040 HPGDSO60760 199 aa14.33□□□□□ -0.12
SNX1-203ENST00000558040 ZNF780AO75290 641 aaPredicted RBP14.33□□□□□ -0.12
SNX1-203ENST00000558040 IGHV1-46P01743 117 aa14.33□□□□□ -0.12
SNX1-203ENST00000558040 GRPP07492 148 aa14.33□□□□□ -0.12
SNX1-203ENST00000558040 TNFAIP6P98066 277 aaPredicted RBP14.33□□□□□ -0.12
SNX1-203ENST00000558040 IL24Q13007 206 aa14.33□□□□□ -0.12
SNX1-203ENST00000558040 ZNF154Q13106 437 aa14.33□□□□□ -0.12
SNX1-203ENST00000558040 RSU1Q15404 277 aa14.33□□□□□ -0.12
SNX1-203ENST00000558040 FAM189A2Q15884 450 aa14.33□□□□□ -0.12
SNX1-203ENST00000558040 SLC25A26Q70HW3 274 aa14.33□□□□□ -0.12
SNX1-203ENST00000558040 LRRC28Q86X40 367 aaPredicted RBP14.33□□□□□ -0.12
SNX1-203ENST00000558040 CALHM1Q8IU99 346 aa14.33□□□□□ -0.12
SNX1-203ENST00000558040 OR5H6Q8NGV6 325 aa14.33□□□□□ -0.12
SNX1-203ENST00000558040 OR51F2Q8NH61 342 aa14.33□□□□□ -0.12
SNX1-203ENST00000558040 KCNG3Q8TAE7 436 aa14.33□□□□□ -0.12
SNX1-203ENST00000558040 PTX4Q96A99 478 aa14.33□□□□□ -0.12
SNX1-203ENST00000558040 FBLN5Q9UBX5 448 aa14.33□□□□□ -0.12
SNX1-203ENST00000558040 IL19Q9UHD0 177 aa14.33□□□□□ -0.12
SNX1-203ENST00000558040 DOPEY1Q5JWR5 2465 aa14.33□□□□□ -0.12
SNX1-203ENST00000558040 TMEM272A0A1B0GTI8 110 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 FAM25AB3EWG3 89 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 FAM25CB3EWG5 89 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 FAM25GB3EWG6 89 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 APOA1P02647 267 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 CSTBP04080 98 aaKnown RBP14.32□□□□□ -0.12
SNX1-203ENST00000558040 CD55P08174 381 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 BMP4P12644 408 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 RAB6AP20340 208 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 MPZP25189 248 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 ART1P52961 327 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 MAB21L1Q13394 359 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 LSAMPQ13449 338 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 SWI5Q1ZZU3 235 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 MST1LQ2TV78 715 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 PCGF3Q3KNV8 242 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 SLC22A6Q4U2R8 563 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 FAM209AQ5JX71 171 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 SP5Q6BEB4 398 aaPredicted RBP14.32□□□□□ -0.12
SNX1-203ENST00000558040 ASCL4Q6XD76 172 aa14.32□□□□□ -0.12
SNX1-203ENST00000558040 WDR86Q86TI4 376 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms