RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 CHD3Q12873 2000 aaKnown RBP17.94■□□□□ 0.46
CASC4-204ENST00000557945 PRRC2AP48634 2157 aaKnown RBP17.94■□□□□ 0.46
CASC4-204ENST00000557945 CLDN25C9JDP6 229 aa17.93■□□□□ 0.46
CASC4-204ENST00000557945 MAGEB3O15480 346 aa17.93■□□□□ 0.46
CASC4-204ENST00000557945 CYB5R3P00387 301 aaPredicted RBP17.93■□□□□ 0.46
CASC4-204ENST00000557945 JUNBP17275 347 aaPredicted RBP17.93■□□□□ 0.46
CASC4-204ENST00000557945 HAAOP46952 286 aa17.93■□□□□ 0.46
CASC4-204ENST00000557945 RBP2P50120 134 aa17.93■□□□□ 0.46
CASC4-204ENST00000557945 ATP1B3P54709 279 aa17.93■□□□□ 0.46
CASC4-204ENST00000557945 TMEM91Q6ZNR0 172 aa17.93■□□□□ 0.46
CASC4-204ENST00000557945 ANGPTL5Q86XS5 388 aa17.93■□□□□ 0.46
CASC4-204ENST00000557945 KRTAP1-3Q8IUG1 177 aa17.93■□□□□ 0.46
CASC4-204ENST00000557945 C11orf53Q8IXP5 236 aa17.93■□□□□ 0.46
CASC4-204ENST00000557945 BOLLQ8N9W6 283 aaKnown RBP17.93■□□□□ 0.46
CASC4-204ENST00000557945 OR51A2Q8NGJ7 313 aa17.93■□□□□ 0.46
CASC4-204ENST00000557945 Q8TCH9 128 aa17.93■□□□□ 0.46
CASC4-204ENST00000557945 C10orf105Q8TEF2 133 aa17.93■□□□□ 0.46
CASC4-204ENST00000557945 PIMREGQ9BSJ6 248 aa17.93■□□□□ 0.46
CASC4-204ENST00000557945 DYSFO75923 2080 aa17.93■□□□□ 0.46
CASC4-204ENST00000557945 TRAV8-7A0A075B6U6 113 aa17.92■□□□□ 0.46
CASC4-204ENST00000557945 GABRPO00591 440 aa17.92■□□□□ 0.46
CASC4-204ENST00000557945 ALX3O95076 343 aa17.92■□□□□ 0.46
CASC4-204ENST00000557945 FSTP19883 344 aa17.92■□□□□ 0.46
CASC4-204ENST00000557945 TMEM33P57088 247 aa17.92■□□□□ 0.46
CASC4-204ENST00000557945 HSD17B12Q53GQ0 312 aa17.92■□□□□ 0.46
CASC4-204ENST00000557945 ZNF529Q6P280 563 aa17.92■□□□□ 0.46
CASC4-204ENST00000557945 LHFPL2Q6ZUX7 228 aa17.92■□□□□ 0.46
CASC4-204ENST00000557945 PEG10Q86TG7 708 aaKnown RBP17.92■□□□□ 0.46
CASC4-204ENST00000557945 C1orf87Q8N0U7 546 aa17.92■□□□□ 0.46
CASC4-204ENST00000557945 Q96MF0 132 aa17.92■□□□□ 0.46
CASC4-204ENST00000557945 SPACA5Q96QH8 159 aa17.92■□□□□ 0.46
CASC4-204ENST00000557945 TLNRD1Q9H1K6 362 aa17.92■□□□□ 0.46
CASC4-204ENST00000557945 TCF7L1Q9HCS4 588 aa17.92■□□□□ 0.46
CASC4-204ENST00000557945 RNF7Q9UBF6 113 aa17.92■□□□□ 0.46
CASC4-204ENST00000557945 IGKV1-27A0A075B6S5 117 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 IGHV4-30-2A0A087WSY4 118 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 TMEM178BH3BS89 294 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 J3QT63 122 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 NDUFS8O00217 210 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 SC5DO75845 299 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 PLATP00750 562 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 CD36P16671 472 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 IGFBP3P17936 291 aaPredicted RBP17.91■□□□□ 0.46
CASC4-204ENST00000557945 GPR6P46095 362 aaPredicted RBP17.91■□□□□ 0.46
CASC4-204ENST00000557945 RIN1Q13671 783 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 ZNF181Q2M3W8 571 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 WDR82Q6UXN9 313 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 DNM1P46Q6ZS02 220 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 SATL1Q86VE3 508 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 WFDC11Q8NEX6 87 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 LRRC29Q8WV35 223 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 RFT1Q96AA3 541 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 TIMD4Q96H15 378 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 METTL17Q9H7H0 456 aaPredicted RBP17.91■□□□□ 0.46
CASC4-204ENST00000557945 EXOSC4Q9NPD3 245 aaKnown RBP17.91■□□□□ 0.46
CASC4-204ENST00000557945 TMEM138Q9NPI0 162 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 FOXJ3Q9UPW0 622 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 GPX5O75715 221 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 MAS1P04201 325 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 UCHL1P09936 223 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 GIFP27352 417 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 BDKRB2P30411 391 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 POU3F4P49335 361 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 GMFBP60983 142 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 AVPI1Q5T686 147 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 CALHM1Q8IU99 346 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 OR52N4Q8NGI2 321 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 AQP3Q92482 292 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 PHYHIPQ92561 330 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 RAB1CQ92928 201 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 BPESC1Q9GZL8 116 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 PPIL3Q9H2H8 161 aaKnown RBP17.91■□□□□ 0.46
CASC4-204ENST00000557945 STUB1Q9UNE7 303 aa17.91■□□□□ 0.46
CASC4-204ENST00000557945 TRDV1A0A1B0GX56 115 aa17.9■□□□□ 0.46
CASC4-204ENST00000557945 RHBDL1O75783 438 aa17.9■□□□□ 0.46
CASC4-204ENST00000557945 ARL6IP5O75915 188 aa17.9■□□□□ 0.46
CASC4-204ENST00000557945 ZNF205O95201 554 aa17.9■□□□□ 0.46
CASC4-204ENST00000557945 HOXA4Q00056 320 aaPredicted RBP17.9■□□□□ 0.46
CASC4-204ENST00000557945 FAM201AQ5SY85 155 aa17.9■□□□□ 0.46
CASC4-204ENST00000557945 DDI2Q5TDH0 399 aa17.9■□□□□ 0.46
CASC4-204ENST00000557945 CD200R1LQ6Q8B3 271 aa17.9■□□□□ 0.46
CASC4-204ENST00000557945 RNF144BQ7Z419 303 aa17.9■□□□□ 0.46
CASC4-204ENST00000557945 ZNF671Q8TAW3 534 aa17.9■□□□□ 0.46
CASC4-204ENST00000557945 GPER1Q99527 375 aa17.9■□□□□ 0.46
CASC4-204ENST00000557945 SLITRK2Q9H156 845 aa17.9■□□□□ 0.46
CASC4-204ENST00000557945 SSR3Q9UNL2 185 aa17.9■□□□□ 0.46
CASC4-204ENST00000557945 POLDIP2Q9Y2S7 368 aa17.9■□□□□ 0.46
CASC4-204ENST00000557945 NPTNQ9Y639 398 aa17.9■□□□□ 0.46
CASC4-204ENST00000557945 TRIM64BA6NI03 449 aa17.89■□□□□ 0.45
CASC4-204ENST00000557945 SYNGR1O43759 233 aa17.89■□□□□ 0.45
CASC4-204ENST00000557945 ALDOBP05062 364 aa17.89■□□□□ 0.45
CASC4-204ENST00000557945 GADD45AP24522 165 aa17.89■□□□□ 0.45
CASC4-204ENST00000557945 CALRP27797 417 aaKnown RBP17.89■□□□□ 0.45
CASC4-204ENST00000557945 NR4A2P43354 598 aa17.89■□□□□ 0.45
CASC4-204ENST00000557945 KISS1Q15726 138 aa17.89■□□□□ 0.45
CASC4-204ENST00000557945 SLC25A26Q70HW3 274 aa17.89■□□□□ 0.45
CASC4-204ENST00000557945 OR5D18Q8NGL1 313 aa17.89■□□□□ 0.45
CASC4-204ENST00000557945 CPNE2Q96FN4 548 aaPredicted RBP17.89■□□□□ 0.45
CASC4-204ENST00000557945 PKIBQ9C010 78 aa17.89■□□□□ 0.45
CASC4-204ENST00000557945 OR51E2Q9H255 320 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms