RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 TTTY10Q9BZA0 68 aa12.01□□□□□ -0.49
SHMT2-235ENST00000557740 OR51I2Q9H344 312 aa12.01□□□□□ -0.49
SHMT2-235ENST00000557740 ELL3Q9HB65 397 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-235ENST00000557740 GPR84Q9NQS5 396 aa12.01□□□□□ -0.49
SHMT2-235ENST00000557740 GTF2A1LQ9UNN4 478 aa12.01□□□□□ -0.49
SHMT2-235ENST00000557740 IGKV1D-17A0A075B6S4 117 aa12□□□□□ -0.49
SHMT2-235ENST00000557740 TCRBV3S1A0A5B6 114 aa12□□□□□ -0.49
SHMT2-235ENST00000557740 MEIOCA2RUB1 952 aa12□□□□□ -0.49
SHMT2-235ENST00000557740 CCDC182A6NF36 153 aa12□□□□□ -0.49
SHMT2-235ENST00000557740 ZNF254O75437 659 aa12□□□□□ -0.49
SHMT2-235ENST00000557740 FAHP16930 419 aa12□□□□□ -0.49
SHMT2-235ENST00000557740 SAA4P35542 130 aa12□□□□□ -0.49
SHMT2-235ENST00000557740 CAPZA1P52907 286 aa12□□□□□ -0.49
SHMT2-235ENST00000557740 CRISP1P54107 249 aa12□□□□□ -0.49
SHMT2-235ENST00000557740 DLX1P56177 255 aa12□□□□□ -0.49
SHMT2-235ENST00000557740 ROM1Q03395 351 aa12□□□□□ -0.49
SHMT2-235ENST00000557740 RIPPLY1Q0D2K3 151 aa12□□□□□ -0.49
SHMT2-235ENST00000557740 TAF9Q16594 264 aa12□□□□□ -0.49
SHMT2-235ENST00000557740 MIDNQ504T8 468 aa12□□□□□ -0.49
SHMT2-235ENST00000557740 C1orf122Q6ZSJ8 110 aa12□□□□□ -0.49
SHMT2-235ENST00000557740 MOB3CQ70IA8 216 aa12□□□□□ -0.49
SHMT2-235ENST00000557740 ZNF679Q8IYX0 411 aa12□□□□□ -0.49
SHMT2-235ENST00000557740 FAM185AQ8N0U4 392 aa12□□□□□ -0.49
SHMT2-235ENST00000557740 OR5A2Q8NGI9 324 aa12□□□□□ -0.49
SHMT2-235ENST00000557740 NRBF2Q96F24 287 aa12□□□□□ -0.49
SHMT2-235ENST00000557740 OR8B4Q96RC9 309 aa12□□□□□ -0.49
SHMT2-235ENST00000557740 TEAD3Q99594 435 aa12□□□□□ -0.49
SHMT2-235ENST00000557740 NUFIP1Q9UHK0 495 aaKnown RBP12□□□□□ -0.49
SHMT2-235ENST00000557740 ENPP5Q9UJA9 477 aa12□□□□□ -0.49
SHMT2-235ENST00000557740 PIGLQ9Y2B2 252 aa12□□□□□ -0.49
SHMT2-235ENST00000557740 TRBV23-1A0A0A0MS06 115 aa11.99□□□□□ -0.49
SHMT2-235ENST00000557740 MTRF1O75570 445 aaKnown RBP11.99□□□□□ -0.49
SHMT2-235ENST00000557740 PSG2P11465 335 aa11.99□□□□□ -0.49
SHMT2-235ENST00000557740 UBE2E1P51965 193 aa11.99□□□□□ -0.49
SHMT2-235ENST00000557740 DEFA6Q01524 100 aa11.99□□□□□ -0.49
SHMT2-235ENST00000557740 MFGE8Q08431 387 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-235ENST00000557740 SMIM21Q3B7S5 101 aa11.99□□□□□ -0.49
SHMT2-235ENST00000557740 DMRTC1Q5HYR2 192 aa11.99□□□□□ -0.49
SHMT2-235ENST00000557740 ZNF684Q5T5D7 378 aa11.99□□□□□ -0.49
SHMT2-235ENST00000557740 ZBTB37Q5TC79 503 aa11.99□□□□□ -0.49
SHMT2-235ENST00000557740 FAHD1Q6P587 224 aa11.99□□□□□ -0.49
SHMT2-235ENST00000557740 HAGHLQ6PII5 290 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-235ENST00000557740 KRT74Q7RTS7 529 aa11.99□□□□□ -0.49
SHMT2-235ENST00000557740 PNKDQ8N490 385 aa11.99□□□□□ -0.49
SHMT2-235ENST00000557740 ZNRF1Q8ND25 227 aa11.99□□□□□ -0.49
SHMT2-235ENST00000557740 OR5R1Q8NH85 324 aa11.99□□□□□ -0.49
SHMT2-235ENST00000557740 AQP3Q92482 292 aa11.99□□□□□ -0.49
SHMT2-235ENST00000557740 TNFRSF14Q92956 283 aa11.99□□□□□ -0.49
SHMT2-235ENST00000557740 UBE2FQ969M7 185 aa11.99□□□□□ -0.49
SHMT2-235ENST00000557740 DUS3LQ96G46 650 aaKnown RBP11.99□□□□□ -0.49
SHMT2-235ENST00000557740 MOB1AQ9H8S9 216 aa11.99□□□□□ -0.49
SHMT2-235ENST00000557740 COPS3Q9UNS2 423 aa11.99□□□□□ -0.49
SHMT2-235ENST00000557740 POMPQ9Y244 141 aa11.99□□□□□ -0.49
SHMT2-235ENST00000557740 WNK1Q9H4A3 2382 aa11.99□□□□□ -0.49
SHMT2-235ENST00000557740 PRR32B1ATL7 298 aa11.98□□□□□ -0.49
SHMT2-235ENST00000557740 LOC110117498-PIK3R3F6TDL0 507 aa11.98□□□□□ -0.49
SHMT2-235ENST00000557740 H0YAE9 185 aa11.98□□□□□ -0.49
SHMT2-235ENST00000557740 ANGPTL7O43827 346 aa11.98□□□□□ -0.49
SHMT2-235ENST00000557740 PRKYO43930 277 aa11.98□□□□□ -0.49
SHMT2-235ENST00000557740 DHRS3O75911 302 aa11.98□□□□□ -0.49
SHMT2-235ENST00000557740 DNAJC8O75937 253 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-235ENST00000557740 CLPXO76031 633 aa11.98□□□□□ -0.49
SHMT2-235ENST00000557740 NRASP01111 189 aa11.98□□□□□ -0.49
SHMT2-235ENST00000557740 ESRRGP62508 458 aa11.98□□□□□ -0.49
SHMT2-235ENST00000557740 ACSM1Q08AH1 577 aa11.98□□□□□ -0.49
SHMT2-235ENST00000557740 PTGES3Q15185 160 aaKnown RBP11.98□□□□□ -0.49
SHMT2-235ENST00000557740 OCLNQ16625 522 aa11.98□□□□□ -0.49
SHMT2-235ENST00000557740 BCL2L15Q5TBC7 163 aa11.98□□□□□ -0.49
SHMT2-235ENST00000557740 ZNF322Q6U7Q0 402 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-235ENST00000557740 Q6ZSV7 163 aa11.98□□□□□ -0.49
SHMT2-235ENST00000557740 ZSCAN4Q8NAM6 433 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-235ENST00000557740 OR5D13Q8NGL4 314 aa11.98□□□□□ -0.49
SHMT2-235ENST00000557740 MMP27Q9H306 513 aa11.98□□□□□ -0.49
SHMT2-235ENST00000557740 TCF7L1Q9HCS4 588 aa11.98□□□□□ -0.49
SHMT2-235ENST00000557740 RASL12Q9NYN1 266 aa11.98□□□□□ -0.49
SHMT2-235ENST00000557740 H2AFY2Q9P0M6 372 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-235ENST00000557740 ZNF222Q9UK12 451 aa11.98□□□□□ -0.49
SHMT2-235ENST00000557740 ANKRD61A6NGH8 418 aa11.97□□□□□ -0.49
SHMT2-235ENST00000557740 SLC22A31A6NKX4 558 aa11.97□□□□□ -0.49
SHMT2-235ENST00000557740 M0R129 80 aa11.97□□□□□ -0.49
SHMT2-235ENST00000557740 SLC1A7O00341 560 aa11.97□□□□□ -0.49
SHMT2-235ENST00000557740 TGFBR2P37173 567 aa11.97□□□□□ -0.49
SHMT2-235ENST00000557740 HAAOP46952 286 aa11.97□□□□□ -0.49
SHMT2-235ENST00000557740 DAPP51397 102 aa11.97□□□□□ -0.49
SHMT2-235ENST00000557740 PROK1P58294 105 aa11.97□□□□□ -0.49
SHMT2-235ENST00000557740 KRTAP10-3P60369 221 aa11.97□□□□□ -0.49
SHMT2-235ENST00000557740 CXCR4P61073 352 aa11.97□□□□□ -0.49
SHMT2-235ENST00000557740 ACTR3P61158 418 aa11.97□□□□□ -0.49
SHMT2-235ENST00000557740 PDLIM3Q53GG5 364 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-235ENST00000557740 CLVS2Q5SYC1 327 aa11.97□□□□□ -0.49
SHMT2-235ENST00000557740 ACP7Q6ZNF0 438 aa11.97□□□□□ -0.49
SHMT2-235ENST00000557740 ZNF573Q86YE8 665 aa11.97□□□□□ -0.49
SHMT2-235ENST00000557740 SLC35F2Q8IXU6 374 aa11.97□□□□□ -0.49
SHMT2-235ENST00000557740 POC1AQ8NBT0 407 aa11.97□□□□□ -0.49
SHMT2-235ENST00000557740 OR5K1Q8NHB7 308 aa11.97□□□□□ -0.49
SHMT2-235ENST00000557740 SDSLQ96GA7 329 aa11.97□□□□□ -0.49
SHMT2-235ENST00000557740 MNTQ99583 582 aa11.97□□□□□ -0.49
SHMT2-235ENST00000557740 C16orf95Q9H693 158 aa11.97□□□□□ -0.49
SHMT2-235ENST00000557740 KRT84Q9NSB2 600 aa11.97□□□□□ -0.49
SHMT2-235ENST00000557740 POLDIP2Q9Y2S7 368 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms