RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 CSTBP04080 98 aaKnown RBP10.73□□□□□ -0.69
SHMT2-233ENST00000557529 SERPINA2P20848 420 aa10.73□□□□□ -0.69
SHMT2-233ENST00000557529 PLA2G5P39877 138 aa10.73□□□□□ -0.69
SHMT2-233ENST00000557529 PDZK1IP1Q13113 114 aa10.73□□□□□ -0.69
SHMT2-233ENST00000557529 PLA1AQ53H76 456 aa10.73□□□□□ -0.69
SHMT2-233ENST00000557529 RSBN1Q5VWQ0 802 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-233ENST00000557529 Q6ZTK2 550 aa10.73□□□□□ -0.69
SHMT2-233ENST00000557529 SAXO1Q8IYX7 474 aa10.73□□□□□ -0.69
SHMT2-233ENST00000557529 CADM3Q8N126 398 aa10.73□□□□□ -0.69
SHMT2-233ENST00000557529 OR51T1Q8NGJ9 327 aa10.73□□□□□ -0.69
SHMT2-233ENST00000557529 OR1J1Q8NGS3 322 aa10.73□□□□□ -0.69
SHMT2-233ENST00000557529 S100PBPQ96BU1 408 aa10.73□□□□□ -0.69
SHMT2-233ENST00000557529 CMBLQ96DG6 245 aa10.73□□□□□ -0.69
SHMT2-233ENST00000557529 RAB3CQ96E17 227 aa10.73□□□□□ -0.69
SHMT2-233ENST00000557529 MRPS24Q96EL2 167 aaKnown RBP10.73□□□□□ -0.69
SHMT2-233ENST00000557529 POM121Q96HA1 1249 aa10.73□□□□□ -0.69
SHMT2-233ENST00000557529 VKORC1Q9BQB6 163 aa10.73□□□□□ -0.69
SHMT2-233ENST00000557529 NICN1Q9BSH3 213 aa10.73□□□□□ -0.69
SHMT2-233ENST00000557529 MARVELD1Q9BSK0 173 aa10.73□□□□□ -0.69
SHMT2-233ENST00000557529 SELENOIQ9C0D9 397 aa10.73□□□□□ -0.69
SHMT2-233ENST00000557529 HRASLSQ9HDD0 168 aa10.73□□□□□ -0.69
SHMT2-233ENST00000557529 MRPL15Q9P015 296 aaKnown RBP10.73□□□□□ -0.69
SHMT2-233ENST00000557529 DCHS1Q96JQ0 3298 aa10.73□□□□□ -0.69
SHMT2-233ENST00000557529 PRRC2CQ9Y520 2896 aaKnown RBP10.72□□□□□ -0.69
SHMT2-233ENST00000557529 MAP1BP46821 2468 aaKnown RBP10.72□□□□□ -0.69
SHMT2-233ENST00000557529 IGHV1-18A0A0C4DH31 117 aa10.72□□□□□ -0.69
SHMT2-233ENST00000557529 HTR3BO95264 441 aa10.72□□□□□ -0.69
SHMT2-233ENST00000557529 MT-ND4P03905 459 aa10.72□□□□□ -0.69
SHMT2-233ENST00000557529 GTF2F2P13984 249 aa10.72□□□□□ -0.69
SHMT2-233ENST00000557529 BTCP35070 178 aa10.72□□□□□ -0.69
SHMT2-233ENST00000557529 GUCA2AQ02747 115 aa10.72□□□□□ -0.69
SHMT2-233ENST00000557529 PPA1Q15181 289 aa10.72□□□□□ -0.69
SHMT2-233ENST00000557529 PNLIPRP3Q17RR3 467 aa10.72□□□□□ -0.69
SHMT2-233ENST00000557529 PCGF3Q3KNV8 242 aa10.72□□□□□ -0.69
SHMT2-233ENST00000557529 SPATA46Q5T0L3 261 aa10.72□□□□□ -0.69
SHMT2-233ENST00000557529 OR2T2Q6IF00 324 aa10.72□□□□□ -0.69
SHMT2-233ENST00000557529 SSX8Q7RTT4 187 aa10.72□□□□□ -0.69
SHMT2-233ENST00000557529 ST6GALNAC3Q8NDV1 305 aa10.72□□□□□ -0.69
SHMT2-233ENST00000557529 OR10K1Q8NGX5 313 aa10.72□□□□□ -0.69
SHMT2-233ENST00000557529 SLC25A40Q8TBP6 338 aa10.72□□□□□ -0.69
SHMT2-233ENST00000557529 HPSE2Q8WWQ2 592 aa10.72□□□□□ -0.69
SHMT2-233ENST00000557529 OR5P3Q8WZ94 311 aa10.72□□□□□ -0.69
SHMT2-233ENST00000557529 CACNG6Q9BXT2 260 aa10.72□□□□□ -0.69
SHMT2-233ENST00000557529 OR2J1Q9GZK6 312 aa10.72□□□□□ -0.69
SHMT2-233ENST00000557529 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.72□□□□□ -0.69
SHMT2-233ENST00000557529 NPAP1Q9NZP6 1156 aa10.72□□□□□ -0.69
SHMT2-233ENST00000557529 SH3BGRL2Q9UJC5 107 aa10.72□□□□□ -0.69
SHMT2-233ENST00000557529 NUBP2Q9Y5Y2 271 aa10.72□□□□□ -0.69
SHMT2-233ENST00000557529 NCOR2Q9Y618 2525 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 A0A0A6YYD4 124 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 IGHV2OR16-5A0A0B4J2B6 119 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 A0A1W2PP11 408 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 TMEM235A6NFC5 223 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 IQCF6A8MYZ5 107 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 SOCS1O15524 211 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 AKR7A2O43488 359 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 SPRY1O43609 319 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-233ENST00000557529 ANGPTL7O43827 346 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 CYB5AP00167 134 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 PLATP00750 562 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 AKAIN1P0CW23 69 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 HIST1H1DP16402 221 aaKnown RBP10.71□□□□□ -0.69
SHMT2-233ENST00000557529 GIFP27352 417 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 RCVRNP35243 200 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 TAS2R19P59542 299 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 BTG1P62324 171 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 TMEM200AQ86VY9 491 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 ZNF573Q86YE8 665 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 MKXQ8IYA7 352 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 KDF1Q8NAX2 398 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-233ENST00000557529 TMEM229BQ8NBD8 167 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 OR51F2Q8NH61 342 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 CHAC2Q8WUX2 184 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 RND1Q92730 232 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 MARS2Q96GW9 593 aaKnown RBP10.71□□□□□ -0.69
SHMT2-233ENST00000557529 RNF170Q96K19 258 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 Q96M66 194 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 DMRTA2Q96SC8 542 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 ACTR6Q9GZN1 396 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 OR10A4Q9H209 315 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 ZMAT3Q9HA38 289 aaKnown RBP10.71□□□□□ -0.69
SHMT2-233ENST00000557529 JKAMPQ9P055 326 aa10.71□□□□□ -0.69
SHMT2-233ENST00000557529 ZFHX4Q86UP3 3567 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 DMXL2Q8TDJ6 3036 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 CFAP47Q6ZTR5 3102 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 TRGV8A0A0C4DH27 118 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 WIPF3A6NGB9 483 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 FOXI3A8MTJ6 420 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-233ENST00000557529 ZNF732B4DXR9 585 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 INMT-MINDY4F8WBC2 141 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 C16orf97H3BN30 126 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 TCRBP04435 133 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 GNB3P16520 340 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 BLVRBP30043 206 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-233ENST00000557529 CBX5P45973 191 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 GPM6AP51674 278 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 GNG2P59768 71 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 GNG3P63215 75 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 NAAAQ02083 359 aa10.7□□□□□ -0.7
SHMT2-233ENST00000557529 PLAC9Q5JTB6 97 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms