RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PPP1R17O96001 155 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 GRPP07492 148 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 LGALS7P47929 136 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 AESQ08117 197 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 USP53Q70EK8 1073 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 NUDT10Q8NFP7 164 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 HOXA6P31267 233 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 GPR3P46089 330 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 HLA-DRB5Q30154 266 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 CLDN23Q96B33 292 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 S1PR5Q9H228 398 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 CES1P1Q9UKY3 287 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 CDX4O14627 284 aaPredicted RBP7.99□□□□□ -1.13
SYNE3-205ENST00000557275 DAPP51397 102 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 MEX3DQ86XN8 651 aaKnown RBP7.99□□□□□ -1.13
SYNE3-205ENST00000557275 CCDC168Q8NDH2 2452 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 SNRNP40Q96DI7 357 aaKnown RBP7.99□□□□□ -1.13
SYNE3-205ENST00000557275 DIRC2Q96SL1 478 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 CMC2Q9NRP2 79 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 ST3GAL6Q9Y274 331 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 H3BNC9 293 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 FURINP09958 794 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 CD40P25942 277 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 SYT8Q8NBV8 401 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 SLCO3A1Q9UIG8 710 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 ECM29Q5VYK3 1845 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 HLA-DQA1P01909 254 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 ARRB2P32121 409 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 HLA-DRB3P79483 266 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 Q56UQ5 140 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 C1QTNF6Q9BXI9 259 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 TSPAN12O95859 305 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 CCL5P13501 91 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 COL8A1P27658 744 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 D2HGDHQ8N465 521 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 TMEM40Q8WWA1 233 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 TNFSF10P50591 281 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 GNB2P62879 340 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 ISL2Q96A47 359 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 FAM53CQ9NYF3 392 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 C1RLQ9NZP8 487 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 OR2W1Q9Y3N9 320 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 RBFOX3A6NFN3 312 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 OR52E1Q8NGJ3 308 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 ZDHHC16Q969W1 377 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 ACY3Q96HD9 319 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 GPX5O75715 221 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 ABLIM3O94929 683 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 HYAL1Q12794 435 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 SAXO2Q658L1 398 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 CYB5R2Q6BCY4 276 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 TXNRD3NBQ6F5E7 133 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 PLPP6Q8IY26 295 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 TMEM262E9PQX1 116 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 CD38P28907 300 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 EXOSC7Q15024 291 aaKnown RBP7.99□□□□□ -1.13
SYNE3-205ENST00000557275 OSR2Q8N2R0 312 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 PEF1Q9UBV8 284 aaKnown RBP7.99□□□□□ -1.13
SYNE3-205ENST00000557275 TRAPPC4Q9Y296 219 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 A0A1B0GX78 115 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 IFITM10A6NMD0 228 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 C16orf70Q9BSU1 422 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 TREX1Q9NSU2 369 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 IL36GQ9NZH8 169 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 IL2RAP01589 272 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 P2RY2P41231 377 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 COL19A1Q14993 1142 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 NUFIP2Q7Z417 695 aaKnown RBP7.99□□□□□ -1.13
SYNE3-205ENST00000557275 GDF7Q7Z4P5 450 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 PRRX2Q99811 253 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 APOOQ9BUR5 198 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 SLAMF8Q9P0V8 285 aa7.99□□□□□ -1.13
SYNE3-205ENST00000557275 LOC107984156A0A0G2JMH3 177 aa7.98□□□□□ -1.13
SYNE3-205ENST00000557275 EDN1P05305 212 aa7.98□□□□□ -1.13
SYNE3-205ENST00000557275 NMUP48645 174 aa7.98□□□□□ -1.13
SYNE3-205ENST00000557275 ARL17AQ8IVW1 177 aa7.98□□□□□ -1.13
SYNE3-205ENST00000557275 PARP12Q9H0J9 701 aaKnown RBP7.98□□□□□ -1.13
SYNE3-205ENST00000557275 JKAMPQ9P055 326 aa7.98□□□□□ -1.13
SYNE3-205ENST00000557275 LIPGQ9Y5X9 500 aa7.98□□□□□ -1.13
SYNE3-205ENST00000557275 ZNF253O75346 499 aa7.98□□□□□ -1.13
SYNE3-205ENST00000557275 GPANK1O95872 356 aa7.98□□□□□ -1.13
SYNE3-205ENST00000557275 SUMO3P55854 103 aaPredicted RBP7.98□□□□□ -1.13
SYNE3-205ENST00000557275 TMEM267Q0VDI3 215 aaPredicted RBP7.98□□□□□ -1.13
SYNE3-205ENST00000557275 OR52B4Q8NGK2 314 aa7.98□□□□□ -1.13
SYNE3-205ENST00000557275 GABRG3Q99928 467 aa7.98□□□□□ -1.13
SYNE3-205ENST00000557275 CXorf65A6NEN9 183 aa7.98□□□□□ -1.13
SYNE3-205ENST00000557275 HMGN2P46Q86SG4 172 aa7.98□□□□□ -1.13
SYNE3-205ENST00000557275 IL17FQ96PD4 163 aa7.98□□□□□ -1.13
SYNE3-205ENST00000557275 ZMAT3Q9HA38 289 aaKnown RBP7.98□□□□□ -1.13
SYNE3-205ENST00000557275 A0A1B0GWA3 101 aa7.98□□□□□ -1.13
SYNE3-205ENST00000557275 CXorf1O96002 111 aa7.98□□□□□ -1.13
SYNE3-205ENST00000557275 SLC35B1P78383 322 aa7.98□□□□□ -1.13
SYNE3-205ENST00000557275 SLC38A11Q08AI6 406 aa7.98□□□□□ -1.13
SYNE3-205ENST00000557275 CALHM2Q9HA72 323 aa7.98□□□□□ -1.13
SYNE3-205ENST00000557275 HDGFL3Q9Y3E1 203 aa7.98□□□□□ -1.13
SYNE3-205ENST00000557275 C11orf94C9JXX5 98 aa7.98□□□□□ -1.13
SYNE3-205ENST00000557275 HRO43593 1189 aa7.98□□□□□ -1.13
SYNE3-205ENST00000557275 CLPPQ16740 277 aaPredicted RBP7.98□□□□□ -1.13
SYNE3-205ENST00000557275 Q7L0L9 218 aa7.98□□□□□ -1.13
SYNE3-205ENST00000557275 OR4S2Q8NH73 311 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms