RNA–Protein interactions for RNA: ENST00000557206.1

HIF1A-210, Transcript of hypoxia inducible factor 1 subunit alpha, human

TSL 3

Gene HIF1A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIF1A-210	ENST00000557206	STX3	Q13277	289 aa		2.58	□□□□□ -2
HIF1A-210	ENST00000557206	TMEM31	Q5JXX7	168 aa		2.58	□□□□□ -2
HIF1A-210	ENST00000557206	PLEKHG7	Q6ZR37	379 aa		2.58	□□□□□ -2
HIF1A-210	ENST00000557206	SELENOH	Q8IZQ5	122 aa	Known RBP	2.58	□□□□□ -2
HIF1A-210	ENST00000557206	ZNF645	Q8N7E2	425 aa		2.58	□□□□□ -2
HIF1A-210	ENST00000557206	LINC00304	Q8N9R0	145 aa		2.58	□□□□□ -2
HIF1A-210	ENST00000557206	SPANXA2-OT1	Q8N9U9	137 aa		2.58	□□□□□ -2
HIF1A-210	ENST00000557206	C19orf18	Q8NEA5	215 aa		2.58	□□□□□ -2
HIF1A-210	ENST00000557206	OR4M1	Q8NGD0	313 aa		2.58	□□□□□ -2
HIF1A-210	ENST00000557206	OR51L1	Q8NGJ5	315 aa		2.58	□□□□□ -2
HIF1A-210	ENST00000557206	OR4A15	Q8NGL6	344 aa		2.58	□□□□□ -2
HIF1A-210	ENST00000557206	UBA3	Q8TBC4	463 aa		2.58	□□□□□ -2
HIF1A-210	ENST00000557206	MED10	Q9BTT4	135 aa		2.58	□□□□□ -2
HIF1A-210	ENST00000557206	TSGA10	Q9BZW7	698 aa		2.58	□□□□□ -2
HIF1A-210	ENST00000557206	PIGU	Q9H490	435 aa		2.58	□□□□□ -2
HIF1A-210	ENST00000557206	METTL8	Q9H825	291 aa	Known RBP	2.58	□□□□□ -2
HIF1A-210	ENST00000557206	LYRM4	Q9HD34	91 aa		2.58	□□□□□ -2
HIF1A-210	ENST00000557206	ACP6	Q9NPH0	428 aa		2.58	□□□□□ -2
HIF1A-210	ENST00000557206	EURL	Q9NYK6	297 aa		2.58	□□□□□ -2
HIF1A-210	ENST00000557206	ENPP5	Q9UJA9	477 aa		2.58	□□□□□ -2
HIF1A-210	ENST00000557206	RBMX2	Q9Y388	322 aa	Known RBP	2.58	□□□□□ -2
HIF1A-210	ENST00000557206	PPIL1	Q9Y3C6	166 aa		2.58	□□□□□ -2
HIF1A-210	ENST00000557206	INSR	P06213	1382 aa		2.58	□□□□□ -2
HIF1A-210	ENST00000557206	IGKV3D-11	A0A0A0MRZ8	115 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	GOLGA6L4	A6NEF3	574 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	OR6C70	A6NIJ9	312 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	GOLGA8K	D6RF30	607 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206		H3BQV1	296 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	MANBA	O00462	879 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	ITGB1BP1	O14713	200 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	CYTH3	O43739	400 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	RAD1	O60671	282 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	SCN2B	O60939	215 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	NDUFS6	O75380	124 aa	Known RBP	2.57	□□□□□ -2
HIF1A-210	ENST00000557206	SERPINB7	O75635	380 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	MT-ND4	P03905	459 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	CTRB1	P17538	263 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	TCP1	P17987	556 aa	Known RBP	2.57	□□□□□ -2
HIF1A-210	ENST00000557206	NDUFA8	P51970	172 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	GTF2A1	P52655	376 aa	Predicted RBP	2.57	□□□□□ -2
HIF1A-210	ENST00000557206	FLI1	Q01543	452 aa	Predicted RBP	2.57	□□□□□ -2
HIF1A-210	ENST00000557206	IFITM3	Q01628	133 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	PMS2P3	Q13401	168 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	TRMT5	Q32P41	509 aa	Known RBP	2.57	□□□□□ -2
HIF1A-210	ENST00000557206	DNAL1	Q4LDG9	190 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	GCSAML	Q5JQS6	135 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	CDKL4	Q5MAI5	379 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	CLVS2	Q5SYC1	327 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	ZNF470	Q6ECI4	717 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	TTC33	Q6PID6	262 aa	Predicted RBP	2.57	□□□□□ -2
HIF1A-210	ENST00000557206	TMEM220	Q6QAJ8	160 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	AKAP14	Q86UN6	197 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	ARHGAP18	Q8N392	663 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	OR8J2	Q8NGG1	315 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	OR4D6	Q8NGJ1	314 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	OR1P1	Q8NH06	330 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	GTF2H4	Q92759	462 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	GHSR	Q92847	366 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	FAM131C	Q96AQ9	280 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	ZNF514	Q96K75	400 aa	Predicted RBP	2.57	□□□□□ -2
HIF1A-210	ENST00000557206	IP6K3	Q96PC2	410 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	C1orf50	Q9BV19	199 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	HINT2	Q9BX68	163 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	ANGPTL4	Q9BY76	406 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	OR51V1	Q9H2C8	321 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	2.57	□□□□□ -2
HIF1A-210	ENST00000557206	MS4A12	Q9NXJ0	267 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	CFL2	Q9Y281	166 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	PUS1	Q9Y606	427 aa	Known RBP eCLIP	2.57	□□□□□ -2
HIF1A-210	ENST00000557206	SCN1A	P35498	2009 aa		2.57	□□□□□ -2
HIF1A-210	ENST00000557206	GOLGA8J	A6NMD2	632 aa		2.56	□□□□□ -2
HIF1A-210	ENST00000557206		E7EWF7	191 aa		2.56	□□□□□ -2
HIF1A-210	ENST00000557206	TEX46	H3BTG2	121 aa		2.56	□□□□□ -2
HIF1A-210	ENST00000557206	LIN7A	O14910	233 aa	Predicted RBP	2.56	□□□□□ -2
HIF1A-210	ENST00000557206	COCH	O43405	550 aa		2.56	□□□□□ -2
HIF1A-210	ENST00000557206	HLA-H	P01893	362 aa		2.56	□□□□□ -2
HIF1A-210	ENST00000557206	RPN2	P04844	631 aa		2.56	□□□□□ -2
HIF1A-210	ENST00000557206	PGA4	P0DJD7	388 aa		2.56	□□□□□ -2
HIF1A-210	ENST00000557206	PGA3	P0DJD8	388 aa		2.56	□□□□□ -2
HIF1A-210	ENST00000557206	PGA5	P0DJD9	388 aa		2.56	□□□□□ -2
HIF1A-210	ENST00000557206	MLN	P12872	115 aa		2.56	□□□□□ -2
HIF1A-210	ENST00000557206	PSMB6	P28072	239 aa		2.56	□□□□□ -2
HIF1A-210	ENST00000557206	POLR2I	P36954	125 aa	Known RBP	2.56	□□□□□ -2
HIF1A-210	ENST00000557206	CBX5	P45973	191 aa		2.56	□□□□□ -2
HIF1A-210	ENST00000557206	CDC34	P49427	236 aa	Predicted RBP	2.56	□□□□□ -2
HIF1A-210	ENST00000557206	MRPS25	P82663	173 aa	Known RBP	2.56	□□□□□ -2
HIF1A-210	ENST00000557206	NAB1	Q13506	487 aa		2.56	□□□□□ -2
HIF1A-210	ENST00000557206	PSG3	Q16557	428 aa		2.56	□□□□□ -2
HIF1A-210	ENST00000557206	C18orf21	Q32NC0	220 aa	Predicted RBP	2.56	□□□□□ -2
HIF1A-210	ENST00000557206	SLC25A35	Q3KQZ1	300 aa		2.56	□□□□□ -2
HIF1A-210	ENST00000557206	OPN5	Q6U736	354 aa		2.56	□□□□□ -2
HIF1A-210	ENST00000557206	CD300LG	Q6UXG3	332 aa		2.56	□□□□□ -2
HIF1A-210	ENST00000557206	FAM151B	Q6UXP7	276 aa		2.56	□□□□□ -2
HIF1A-210	ENST00000557206	TMPRSS11A	Q6ZMR5	421 aa		2.56	□□□□□ -2
HIF1A-210	ENST00000557206	SLC35D2	Q76EJ3	337 aa		2.56	□□□□□ -2
HIF1A-210	ENST00000557206	PAGE2	Q7Z2X7	111 aa		2.56	□□□□□ -2
HIF1A-210	ENST00000557206	ZNF101	Q8IZC7	436 aa		2.56	□□□□□ -2
HIF1A-210	ENST00000557206	VKORC1L1	Q8N0U8	176 aa		2.56	□□□□□ -2
HIF1A-210	ENST00000557206	FBXO36	Q8NEA4	188 aa		2.56	□□□□□ -2
HIF1A-210	ENST00000557206	RXFP4	Q8TDU9	374 aa		2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms