RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 PGAM5Q96HS1 289 aa10□□□□□ -0.81
SRP54-213ENST00000556994 SHDQ96IW2 340 aa10□□□□□ -0.81
SRP54-213ENST00000556994 PRRX2Q99811 253 aa10□□□□□ -0.81
SRP54-213ENST00000556994 CHRNA10Q9GZZ6 450 aa10□□□□□ -0.81
SRP54-213ENST00000556994 SDHAF3Q9NRP4 125 aa10□□□□□ -0.81
SRP54-213ENST00000556994 FGF21Q9NSA1 209 aa10□□□□□ -0.81
SRP54-213ENST00000556994 ZNF581Q9P0T4 197 aa10□□□□□ -0.81
SRP54-213ENST00000556994 TRBV11-1A0A0K0K1C0 115 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 A6NLC8 198 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 DEDDO75618 318 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 C1QL1O75973 258 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 TSPAN15O95858 294 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 S100A6P06703 90 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 PRSS12P56730 875 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 EIF2S3LQ2VIR3 472 aaKnown RBP9.99□□□□□ -0.81
SRP54-213ENST00000556994 AWAT1Q58HT5 328 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 SLC25A47Q6Q0C1 308 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 SULF2Q8IWU5 870 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 OR10G3Q8NGC4 313 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 OR9K2Q8NGE7 335 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 RHBDD1Q8TEB9 315 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 RSRP1Q9BUV0 290 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 LIME1Q9H400 295 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 TIMM10BQ9Y5J6 103 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 IGHV1OR15-9A0A0B4J2B8 117 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 A0A1W2PNV4 684 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 A0A1W2PR77 199 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 C5orf52A6NGY3 159 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 FOXI3A8MTJ6 420 aaPredicted RBP9.99□□□□□ -0.81
SRP54-213ENST00000556994 M0R036 132 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 XRCC2O43543 280 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 JTBO76095 146 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 DIRAS3O95661 229 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 ZNF43P17038 809 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 PLPPR5Q32ZL2 321 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 TSPO2Q5TGU0 170 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 PPP1R3BQ86XI6 285 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 SGPP2Q8IWX5 399 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 LRRC18Q8N456 261 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 D2HGDHQ8N465 521 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 C15orf54Q8N8G6 183 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 SLC38A9Q8NBW4 561 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 PLPP5Q8NEB5 264 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 TOMM40LQ969M1 308 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 S100A13Q99584 98 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 EIF5A2Q9GZV4 153 aaKnown RBP9.99□□□□□ -0.81
SRP54-213ENST00000556994 RNF122Q9H9V4 155 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 PLEKHJ1Q9NW61 149 aa9.99□□□□□ -0.81
SRP54-213ENST00000556994 A0A1W2PPH5 198 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 C7orf77A4D0Y5 90 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 OR5H15A6NDH6 313 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 ZNF726A6NNF4 738 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 LMO7DNF2Z398 122 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 MSTNO14793 375 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 CCL1P22362 96 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 OPRM1P35372 400 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 THBS4P35443 961 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 S100A12P80511 92 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 CHAF1BQ13112 559 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 TMEM176BQ3YBM2 270 aaPredicted RBP9.98□□□□□ -0.81
SRP54-213ENST00000556994 BRICD5Q6PL45 260 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 ANKRD37Q7Z713 158 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 NAXEQ8NCW5 288 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 RAB33BQ9H082 229 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 SPACA1Q9HBV2 294 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 ZNF160Q9HCG1 818 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 EXPH5Q8NEV8 1989 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 hCG_1809904A0A1W2PP81 198 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 A0A1W2PR64 198 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 A0A1W2PRV1 198 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 MBPP02686 304 aaPredicted RBP9.98□□□□□ -0.81
SRP54-213ENST00000556994 ARG1P05089 322 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 HEXBP07686 556 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 DBHP09172 617 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 TMEM225BP0DP42 221 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 FOLR2P14207 255 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 HOXB1P14653 301 aaPredicted RBP9.98□□□□□ -0.81
SRP54-213ENST00000556994 SNCAP37840 140 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 FABP9Q0Z7S8 132 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 PLXDC1Q8IUK5 500 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 NFAM1Q8NET5 270 aaPredicted RBP9.98□□□□□ -0.81
SRP54-213ENST00000556994 SLC25A43Q8WUT9 341 aaPredicted RBP9.98□□□□□ -0.81
SRP54-213ENST00000556994 ZNF501Q96CX3 271 aaPredicted RBP9.98□□□□□ -0.81
SRP54-213ENST00000556994 REEP6Q96HR9 211 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 FAAP24Q9BTP7 215 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 SH3BGRL3Q9H299 93 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 RGCCQ9H4X1 137 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 METTL7AQ9H8H3 244 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 WFDC1Q9HC57 220 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 NIT2Q9NQR4 276 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.98□□□□□ -0.81
SRP54-213ENST00000556994 PADI1Q9ULC6 663 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 PIGLQ9Y2B2 252 aa9.98□□□□□ -0.81
SRP54-213ENST00000556994 C2CD4DB7Z1M9 353 aa9.97□□□□□ -0.81
SRP54-213ENST00000556994 ANGPTL7O43827 346 aa9.97□□□□□ -0.81
SRP54-213ENST00000556994 IFNA21P01568 189 aa9.97□□□□□ -0.81
SRP54-213ENST00000556994 NAT2P11245 290 aa9.97□□□□□ -0.81
SRP54-213ENST00000556994 CSNK1EP49674 416 aaKnown RBP9.97□□□□□ -0.81
SRP54-213ENST00000556994 ASCL1P50553 236 aa9.97□□□□□ -0.81
SRP54-213ENST00000556994 CLDN17P56750 224 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms