RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 UPK3AO75631 287 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 GLCEO94923 617 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 OR6A2O95222 327 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 VENTXO95231 258 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 FARS2O95363 451 aaKnown RBP3.95□□□□□ -1.78
HIF1A-209ENST00000556827 ANP32DO95626 131 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 PTHP01270 115 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 IGKV3-15P01624 115 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 SHBGP04278 402 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 LYNX1P0DP58 116 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 ACKR3P25106 362 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 CALCRP30988 508 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 IL2RGP31785 369 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 CRATP43155 626 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 CRISP3P54108 245 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 BNIP2Q12982 314 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 TRIP10Q15642 601 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 SYPL1Q16563 259 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 CEACAM16Q2WEN9 425 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 HFEQ30201 348 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 MRPL2Q5T653 305 aaKnown RBP3.95□□□□□ -1.78
HIF1A-209ENST00000556827 CARD17Q5XLA6 110 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 C5orf46Q6UWT4 87 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 ZNF841Q6ZN19 808 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 MDP1Q86V88 176 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 CARM1Q86X55 608 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 RNF130Q86XS8 419 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 NUDCD3Q8IVD9 361 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 LRRC34Q8IZ02 419 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 RIBC1Q8N443 379 aaPredicted RBP3.95□□□□□ -1.78
HIF1A-209ENST00000556827 C10orf53Q8N6V4 93 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 ANKFN1Q8N957 763 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 OR6N1Q8NGY5 312 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 OR52P1PQ8NH57 321 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 CLDND2Q8NHS1 167 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 LIPHQ8WWY8 451 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.95□□□□□ -1.78
HIF1A-209ENST00000556827 RAB1CQ92928 201 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 SLC38A4Q969I6 547 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 MRPL24Q96A35 216 aaKnown RBP3.95□□□□□ -1.78
HIF1A-209ENST00000556827 PPP1R36Q96LQ0 422 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 CCDC115Q96NT0 180 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 OR52E6Q96RD3 313 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 ZNF385DQ9H6B1 395 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 ZNF665Q9H7R5 613 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 RMND5AQ9H871 391 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 NOX3Q9HBY0 568 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 BTNL2Q9UIR0 455 aa3.95□□□□□ -1.78
HIF1A-209ENST00000556827 MED12LQ86YW9 2145 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 TRPC5OSA6NMA1 111 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 SPAG7O75391 227 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 CLN5O75503 358 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 UBL3O95164 117 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 MPZL1O95297 269 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 HLA-HP01893 362 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 SERPINE1P05121 402 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 IL6P05231 212 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 GKN3PP0CG01 181 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 PNMTP11086 282 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 AHCYP23526 432 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 GLRXP35754 106 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 ALDH3B1P43353 468 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 RPS5P46782 204 aaKnown RBP3.94□□□□□ -1.78
HIF1A-209ENST00000556827 RPL14P50914 215 aaKnown RBP3.94□□□□□ -1.78
HIF1A-209ENST00000556827 KLF3P57682 345 aaPredicted RBP3.94□□□□□ -1.78
HIF1A-209ENST00000556827 NCALDP61601 193 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 CCL8P80075 99 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 SLC3A1Q07837 685 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 RBBP4Q09028 425 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 FUT5Q11128 374 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 PMS2P3Q13401 168 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 CASP8Q14790 479 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 DPPA2Q7Z7J5 298 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 SLC25A42Q86VD7 318 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 POM121L12Q8N7R1 296 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 SYNPRQ8TBG9 265 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 PNPT1Q8TCS8 783 aaKnown RBP3.94□□□□□ -1.78
HIF1A-209ENST00000556827 TCP10LQ8TDR4 215 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 ST7LQ8TDW4 575 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 DNAJA4Q8WW22 397 aaPredicted RBP3.94□□□□□ -1.78
HIF1A-209ENST00000556827 C11orf40Q8WZ69 217 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 NABP1Q96AH0 204 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 GPA33Q99795 319 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 MRPL37Q9BZE1 423 aaKnown RBP3.94□□□□□ -1.78
HIF1A-209ENST00000556827 ULBP2Q9BZM5 246 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 SLC38A1Q9H2H9 487 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 C1orf198Q9H425 327 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 TMEM27Q9HBJ8 222 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 ZNF275Q9NSD4 429 aaPredicted RBP3.94□□□□□ -1.78
HIF1A-209ENST00000556827 SLC17A7Q9P2U7 560 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 SLC7A8Q9UHI5 535 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 PSORS1C1Q9UIG5 152 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 USF3Q68DE3 2245 aa3.94□□□□□ -1.78
HIF1A-209ENST00000556827 EXPH5Q8NEV8 1989 aa3.93□□□□□ -1.78
HIF1A-209ENST00000556827 TRAV36DV7A0A075B6V5 113 aa3.93□□□□□ -1.78
HIF1A-209ENST00000556827 IGHV1-69-2A0A0G2JMI3 117 aa3.93□□□□□ -1.78
HIF1A-209ENST00000556827 LOC102725191A0A1B0GVB3 256 aa3.93□□□□□ -1.78
HIF1A-209ENST00000556827 TMEM129A0AVI4 362 aa3.93□□□□□ -1.78
HIF1A-209ENST00000556827 ISPDA4D126 451 aa3.93□□□□□ -1.78
HIF1A-209ENST00000556827 PRORSD1PA6NEY8 169 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms