RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 KLHL12Q53G59 568 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 ALG10Q5BKT4 473 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 DCAF12Q5T6F0 453 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 RUSC1-AS1Q66K80 236 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 OPN5Q6U736 354 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 PAMR1Q6UXH9 720 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 LANCL3Q6ZV70 420 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 HDDC2Q7Z4H3 204 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 SELENOHQ8IZQ5 122 aaKnown RBP4.41□□□□□ -1.7
SRP54-211ENST00000556445 SYS1Q8N2H4 156 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 MS4A15Q8N5U1 240 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 TMEM99Q8N816 258 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 TMEM105Q8N8V8 129 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 APCDD1LQ8NCL9 501 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 OR51G2Q8NGK0 314 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 OR6M1Q8NGM8 313 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 OR6Q1Q8NGQ2 317 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 OR2T27Q8NH04 317 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 ASB5Q8WWX0 329 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 TMEM37Q8WXS4 190 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 PPP1R14BQ96C90 147 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 DDIT4LQ96D03 193 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 CEP19Q96LK0 163 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 KCTD7Q96MP8 289 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 CNN2Q99439 309 aaKnown RBP4.41□□□□□ -1.7
SRP54-211ENST00000556445 TMEM246Q9BRR3 403 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 SLIRPQ9GZT3 109 aaKnown RBP4.41□□□□□ -1.7
SRP54-211ENST00000556445 NXF2Q9GZY0 626 aaKnown RBP4.41□□□□□ -1.7
SRP54-211ENST00000556445 OR51E2Q9H255 320 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 OR51V1Q9H2C8 321 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 RIMS4Q9H426 269 aaPredicted RBP4.41□□□□□ -1.7
SRP54-211ENST00000556445 PTGES2Q9H7Z7 377 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 LPAR2Q9HBW0 351 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 OCIAD1Q9NX40 245 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 BABAM2Q9NXR7 383 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 SLC39A1Q9NY26 324 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 PTTG3PQ9NZH4 202 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 MIOXQ9UGB7 285 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 IER3IP1Q9Y5U9 82 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 TMEM14AQ9Y6G1 99 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 MKI67P46013 3256 aaKnown RBP4.41□□□□□ -1.7
SRP54-211ENST00000556445 FER1L5A0AVI2 2057 aa4.41□□□□□ -1.7
SRP54-211ENST00000556445 IGLV3-32A0A0A0MS00 114 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 TMED7-TICAM2A0A0A6YYA0 188 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 IQCMA0A1B0GVH7 501 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 A0A1W2PP11 408 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 A0A1W2PPE3 182 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 A0A1W2PQ72 361 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 ISPDA4D126 451 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 SERPINE3A8MV23 424 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 CENPBD1B2RD01 187 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 BLOC1S5-TXNDC5H3BN57 136 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 XKRYO14609 159 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 HSPA12AO43301 675 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 IFNA2P01563 188 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 TACSTD2P09758 323 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 ASAH2BP0C7U1 165 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 ZNF806P0C7X5 589 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 NR2C1P13056 603 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 HIST1H1CP16403 213 aaKnown RBP4.4□□□□□ -1.71
SRP54-211ENST00000556445 SLC2A5P22732 501 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 GTF2E2P29084 291 aaKnown RBP4.4□□□□□ -1.71
SRP54-211ENST00000556445 SOX3P41225 446 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 EIF1P41567 113 aaKnown RBP4.4□□□□□ -1.71
SRP54-211ENST00000556445 CRYBB2P43320 205 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 MLLT10P55197 1068 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 CRMP1Q14194 572 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 GGTLC2Q14390 218 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 QPRTQ15274 297 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 SSX1Q16384 188 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 CCDC58Q4VC31 144 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 ZNF544Q6NX49 715 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 DNM1P34Q6PK57 102 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 CD200R1LQ6Q8B3 271 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 ZNF322Q6U7Q0 402 aaPredicted RBP4.4□□□□□ -1.71
SRP54-211ENST00000556445 APOOLQ6UXV4 268 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 PLEKHG7Q6ZR37 379 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 H2BFWTQ7Z2G1 175 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 MARCH3Q86UD3 253 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 LHFPL3Q86UP9 236 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 PRR22Q8IZ63 422 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 ZNF485Q8NCK3 441 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 NPEPL1Q8NDH3 523 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 ATP6V1C2Q8NEY4 427 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 OR52E2Q8NGJ4 325 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 OR4D5Q8NGN0 318 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 OR2Y1Q8NGV0 311 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 OR2T4Q8NH00 348 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 OR5J2Q8NH18 312 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 MFSD8Q8NHS3 518 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 GPR119Q8TDV5 335 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 RNF138Q8WVD3 245 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 HGDQ93099 445 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 TMEM18Q96B42 140 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 FAM122AQ96E09 287 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 PELI1Q96FA3 418 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 AKR1E2Q96JD6 320 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 S1PR3Q99500 378 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 DDA1Q9BW61 102 aa4.4□□□□□ -1.71
SRP54-211ENST00000556445 ANGPTL4Q9BY76 406 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms