RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 EMC8O43402 210 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 PSTPIP1O43586 416 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 EIF1BO60739 113 aaKnown RBP3.27□□□□□ -1.89
PRPF39-209ENST00000556353 ALOX12BO75342 701 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 KLF7O75840 302 aaPredicted RBP3.27□□□□□ -1.89
PRPF39-209ENST00000556353 NUDT14O95848 222 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 EPOP01588 193 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 CRYGBP07316 175 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 CHRNGP07510 517 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 SMIM10L1P0DMW3 83 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 ZNF44P15621 663 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 IDSP22304 550 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 CYLC1P35663 651 aaPredicted RBP3.27□□□□□ -1.89
PRPF39-209ENST00000556353 EIF1P41567 113 aaKnown RBP3.27□□□□□ -1.89
PRPF39-209ENST00000556353 PRLHRP49683 370 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 EFNA3P52797 238 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 ERVS71-1P61550 626 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 ADARB1P78563 741 aaKnown RBP3.27□□□□□ -1.89
PRPF39-209ENST00000556353 CDK16Q00536 496 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 SLC34A1Q06495 639 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 KLRB1Q12918 225 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 PPP1R8Q12972 351 aaKnown RBP3.27□□□□□ -1.89
PRPF39-209ENST00000556353 ASAH1Q13510 395 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 OR1C1Q15619 314 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 DEFB110Q30KQ9 67 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 XKR7Q5GH72 579 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 PODNL1Q6PEZ8 512 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 TMEM220Q6QAJ8 160 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 LRRN1Q6UXK5 716 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 APOOLQ6UXV4 268 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 DLEU7Q6UYE1 221 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 PP632Q6XCG6 107 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 SSX9Q7RTT3 188 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 GLT6D1Q7Z4J2 308 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 IFT20Q8IY31 132 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 BCORP1Q8N888 145 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 CCDC71LQ8N9Z2 235 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 MFSD9Q8NBP5 474 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 FAM83FQ8NEG4 500 aaPredicted RBP3.27□□□□□ -1.89
PRPF39-209ENST00000556353 FDCSPQ8NFU4 85 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 OR10H4Q8NGA5 316 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 OR4K2Q8NGD2 314 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 OR5T3Q8NGG3 340 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 OR4A15Q8NGL6 344 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 KCNG3Q8TAE7 436 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 FNDC8Q8TC99 324 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 C22orf15Q8WYQ4 148 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 MAFIPQ8WZ33 124 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 AP3S1Q92572 193 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 EMG1Q92979 244 aaKnown RBP3.27□□□□□ -1.89
PRPF39-209ENST00000556353 MARC2Q969Z3 335 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 ADIPOR1Q96A54 375 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 S100PBPQ96BU1 408 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 CXorf40BQ96DE9 158 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 SMIM10Q96HG1 83 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 PACRGQ96M98 296 aaPredicted RBP3.27□□□□□ -1.89
PRPF39-209ENST00000556353 S1PR3Q99500 378 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 ZNF2Q9BSG1 426 aaPredicted RBP3.27□□□□□ -1.89
PRPF39-209ENST00000556353 TMEM43Q9BTV4 400 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 CHRDL1Q9BU40 450 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 KIFC1Q9BW19 673 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 NMNAT2Q9BZQ4 307 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 KIR3DX1Q9H7L2 352 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 SRD5A3Q9H8P0 318 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 WDR76Q9H967 626 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 FAM60AQ9NP50 221 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 ZC4H2Q9NQZ6 224 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 AHSPQ9NZD4 102 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 MTCH1Q9NZJ7 389 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 MYEF2Q9P2K5 600 aaKnown RBP3.27□□□□□ -1.89
PRPF39-209ENST00000556353 SEC14L3Q9UDX4 400 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 PRELID3BQ9Y3B1 194 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 ZNF337Q9Y3M9 751 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 NPTNQ9Y639 398 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 SLC22A7Q9Y694 548 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 NBEAL1Q6ZS30 2694 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 KIAA1549Q9HCM3 1950 aa3.27□□□□□ -1.89
PRPF39-209ENST00000556353 METTL15A6NJ78 407 aa3.26□□□□□ -1.89
PRPF39-209ENST00000556353 C21orf140B9A014 251 aa3.26□□□□□ -1.89
PRPF39-209ENST00000556353 RNASEK-C17orf49H0YIS7 233 aa3.26□□□□□ -1.89
PRPF39-209ENST00000556353 APOC4-APOC2K7ER74 178 aa3.26□□□□□ -1.89
PRPF39-209ENST00000556353 ABCD4O14678 606 aa3.26□□□□□ -1.89
PRPF39-209ENST00000556353 GMDSO60547 372 aa3.26□□□□□ -1.89
PRPF39-209ENST00000556353 UPK3AO75631 287 aa3.26□□□□□ -1.89
PRPF39-209ENST00000556353 SCRG1O75711 98 aa3.26□□□□□ -1.89
PRPF39-209ENST00000556353 SRP72O76094 671 aaKnown RBP3.26□□□□□ -1.89
PRPF39-209ENST00000556353 FADS2O95864 444 aaKnown RBP3.26□□□□□ -1.89
PRPF39-209ENST00000556353 APOC2P02655 101 aa3.26□□□□□ -1.89
PRPF39-209ENST00000556353 GSTA1P08263 222 aa3.26□□□□□ -1.89
PRPF39-209ENST00000556353 NR2C1P13056 603 aa3.26□□□□□ -1.89
PRPF39-209ENST00000556353 COX4I1P13073 169 aa3.26□□□□□ -1.89
PRPF39-209ENST00000556353 CPN1P15169 458 aa3.26□□□□□ -1.89
PRPF39-209ENST00000556353 ZNF17P17021 662 aa3.26□□□□□ -1.89
PRPF39-209ENST00000556353 ME2P23368 584 aa3.26□□□□□ -1.89
PRPF39-209ENST00000556353 MAGEA3P43357 314 aa3.26□□□□□ -1.89
PRPF39-209ENST00000556353 YAP1P46937 504 aaKnown RBP3.26□□□□□ -1.89
PRPF39-209ENST00000556353 SRP9P49458 86 aaKnown RBP3.26□□□□□ -1.89
PRPF39-209ENST00000556353 RAB13P51153 203 aa3.26□□□□□ -1.89
PRPF39-209ENST00000556353 CCR8P51685 355 aa3.26□□□□□ -1.89
PRPF39-209ENST00000556353 PSME3P61289 254 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms