RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 V9GYS6 101 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 EML6Q6ZMW3 1958 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 PI4KAP42356 2102 aa6.14□□□□□ -1.43
TDP1-213ENST00000555880 A0A1W2PQM1 296 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 C9J4A7 227 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 F8W036 122 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 H7C2Y5 167 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 K7ESF4 209 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 ABCD4O14678 606 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 DHHO43323 396 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 SIGLEC6O43699 453 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 DKK1O94907 266 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 SNAPINO95295 136 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 KNG1P01042 644 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 IFNA21P01568 189 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 CSTBP04080 98 aaKnown RBP6.13□□□□□ -1.43
TDP1-213ENST00000555880 SERPINA5P05154 406 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 KLK3P07288 261 aaPredicted RBP6.13□□□□□ -1.43
TDP1-213ENST00000555880 HOXB5P09067 269 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 TMEM225BP0DP42 221 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 CD79AP11912 226 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 GLRA1P23415 457 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 SSR4P51571 173 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 ARHGDIBP52566 201 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 DSCR4P56555 118 aaPredicted RBP6.13□□□□□ -1.43
TDP1-213ENST00000555880 BLOC1S1P78537 153 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 H3F3AP84243 136 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 FLI1Q01543 452 aaPredicted RBP6.13□□□□□ -1.43
TDP1-213ENST00000555880 SCRN3Q0VDG4 424 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 ENDOGQ14249 297 aaKnown RBP6.13□□□□□ -1.43
TDP1-213ENST00000555880 IL11RAQ14626 422 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 RSU1Q15404 277 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 STK11Q15831 433 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 PABPC1L2AQ5JQF8 200 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 AADACL3Q5VUY0 350 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 LYSMD4Q5XG99 296 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 MAML2Q8IZL2 1156 aaPredicted RBP6.13□□□□□ -1.43
TDP1-213ENST00000555880 POC1AQ8NBT0 407 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 OR9K2Q8NGE7 335 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 FNDC9Q8TBE3 224 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 ROBO4Q8WZ75 1007 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 SAT2Q96F10 170 aaPredicted RBP6.13□□□□□ -1.43
TDP1-213ENST00000555880 LYZL4Q96KX0 146 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 JSRP1Q96MG2 331 aaPredicted RBP6.13□□□□□ -1.43
TDP1-213ENST00000555880 TM2D1Q9BX74 207 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 ULBP2Q9BZM5 246 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 TREM1Q9NP99 234 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 PLEK2Q9NYT0 353 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 OR5AC2Q9NZP5 309 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 PURGQ9UJV8 347 aaKnown RBP6.13□□□□□ -1.43
TDP1-213ENST00000555880 EDARQ9UNE0 448 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 MED12Q93074 2177 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 COL6A3P12111 3177 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 KIAA1549Q9HCM3 1950 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 OR5H15A6NDH6 313 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 FAM74A7A6NL05 159 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 DHRS7CA6NNS2 312 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 FOXI3A8MTJ6 420 aaPredicted RBP6.13□□□□□ -1.43
TDP1-213ENST00000555880 H0YIZ8 118 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 SIGLEC5O15389 551 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 RRP8O43159 456 aaKnown RBP6.13□□□□□ -1.43
TDP1-213ENST00000555880 IGLV3-1P01715 115 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 LIFP15018 202 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 KLK2P20151 261 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 GABRR1P24046 479 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 AKR1C2P52895 323 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 MTCP1P56278 107 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 AKR1C1Q04828 323 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 SIGLEC14Q08ET2 396 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 RAB32Q13637 225 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 PCOLCEQ15113 449 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 CNN3Q15417 329 aaKnown RBP6.13□□□□□ -1.43
TDP1-213ENST00000555880 UBE2V2Q15819 145 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 IAH1Q2TAA2 248 aaPredicted RBP6.13□□□□□ -1.43
TDP1-213ENST00000555880 FAM74A3Q4VXF1 159 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 LCN10Q6JVE6 187 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 PLXDC2Q6UX71 529 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 FOXL2NBQ6ZUU3 175 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 C1QL2Q7Z5L3 287 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 TMEM123Q8N131 208 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 TMEM156Q8N614 296 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 SEMA6DQ8NFY4 1073 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 MAFIPQ8WZ33 124 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 PIGTQ969N2 578 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 SPSB1Q96BD6 273 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 OR10C1Q96KK4 312 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 ANGPTL4Q9BY76 406 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 METTL9Q9H1A3 318 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 TAF9BQ9HBM6 251 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 OR2S2Q9NQN1 319 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 PRDM6Q9NQX0 595 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 CYTL1Q9NRR1 136 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 HPF1Q9NWY4 346 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 PRR13Q9NZ81 148 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 NDRG3Q9UGV2 375 aa6.13□□□□□ -1.43
TDP1-213ENST00000555880 TRIOBPQ9H2D6 2365 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 PRUNE2Q8WUY3 3088 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 LOC102723996A0A087X1L8 192 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 IGHV1-45A0A0A0MS14 117 aa6.12□□□□□ -1.43
TDP1-213ENST00000555880 IGHV3-15A0A0B4J1V0 119 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms