RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 LRP11Q86VZ4 500 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 C1orf87Q8N0U7 546 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 OR52N4Q8NGI2 321 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 OR51A2Q8NGJ7 313 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 NEUROG1Q92886 237 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 DVL3Q92997 716 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-220ENST00000555634 ERGIC1Q969X5 290 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 ORAI1Q96D31 301 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 C14orf79Q96F83 325 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 CEP19Q96LK0 163 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 CCL19Q99731 98 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 VRK1Q99986 396 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-220ENST00000555634 PKIBQ9C010 78 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 C6orf62Q9GZU0 229 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-220ENST00000555634 RHOFQ9HBH0 211 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 SMURF1Q9HCE7 757 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 PTTG2Q9NZH5 202 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 ABRACLQ9P1F3 81 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 MYEF2Q9P2K5 600 aaKnown RBP9.55□□□□□ -0.88
SHMT2-220ENST00000555634 PLEKHB1Q9UF11 243 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-220ENST00000555634 IL19Q9UHD0 177 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 ETV7Q9Y603 341 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 DSCAMO60469 2012 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 PQLC2LA1A4F0 135 aa9.54□□□□□ -0.88
SHMT2-220ENST00000555634 SMIM30A4D0T7 59 aa9.54□□□□□ -0.88
SHMT2-220ENST00000555634 ZSCAN5BA6NJL1 495 aa9.54□□□□□ -0.88
SHMT2-220ENST00000555634 F5H5P2 479 aa9.54□□□□□ -0.88
SHMT2-220ENST00000555634 RGS5O15539 181 aa9.54□□□□□ -0.88
SHMT2-220ENST00000555634 NCR1O76036 304 aa9.54□□□□□ -0.88
SHMT2-220ENST00000555634 SCGNO76038 276 aa9.54□□□□□ -0.88
SHMT2-220ENST00000555634 GRPP07492 148 aa9.54□□□□□ -0.88
SHMT2-220ENST00000555634 CALCBP10092 127 aa9.54□□□□□ -0.88
SHMT2-220ENST00000555634 NAT2P11245 290 aa9.54□□□□□ -0.88
SHMT2-220ENST00000555634 ARSBP15848 533 aa9.54□□□□□ -0.88
SHMT2-220ENST00000555634 LOXP28300 417 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-220ENST00000555634 TGFBR1P36897 503 aa9.54□□□□□ -0.88
SHMT2-220ENST00000555634 TALDO1P37837 337 aa9.54□□□□□ -0.88
SHMT2-220ENST00000555634 RPS19P39019 145 aaKnown RBP9.54□□□□□ -0.88
SHMT2-220ENST00000555634 DYNC1I2Q13409 638 aaKnown RBP9.54□□□□□ -0.88
SHMT2-220ENST00000555634 HES5Q5TA89 166 aa9.54□□□□□ -0.88
SHMT2-220ENST00000555634 HAGHLQ6PII5 290 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-220ENST00000555634 SAXO1Q8IYX7 474 aa9.54□□□□□ -0.88
SHMT2-220ENST00000555634 ZSCAN4Q8NAM6 433 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-220ENST00000555634 OR5D18Q8NGL1 313 aa9.54□□□□□ -0.88
SHMT2-220ENST00000555634 MCFD2Q8NI22 146 aa9.54□□□□□ -0.88
SHMT2-220ENST00000555634 DYNC2LI1Q8TCX1 351 aa9.54□□□□□ -0.88
SHMT2-220ENST00000555634 HPSE2Q8WWQ2 592 aa9.54□□□□□ -0.88
SHMT2-220ENST00000555634 RFT1Q96AA3 541 aa9.54□□□□□ -0.88
SHMT2-220ENST00000555634 OR2V2Q96R30 315 aa9.54□□□□□ -0.88
SHMT2-220ENST00000555634 METTL9Q9H1A3 318 aa9.54□□□□□ -0.88
SHMT2-220ENST00000555634 PPIL3Q9H2H8 161 aaKnown RBP9.54□□□□□ -0.88
SHMT2-220ENST00000555634 LIN7BQ9HAP6 207 aa9.54□□□□□ -0.88
SHMT2-220ENST00000555634 TENM4Q6N022 2769 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 LOC100289279A0A1B0GTE1 492 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 H3BUI4 141 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 MLNRO43193 412 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 LILRA1O75019 489 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 IGHV1-46P01743 117 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 CD55P08174 381 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 ADH4P08319 380 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 CFPP27918 469 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 PTGFRP43088 359 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 OR10A3P58181 314 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 IL24Q13007 206 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 CNPY1Q3B7I2 92 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 SMIM21Q3B7S5 101 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 ZNF404Q494X3 552 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 SLC25A26Q70HW3 274 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 DTX2Q86UW9 622 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 TBC1D15Q8TC07 691 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 NEU4Q8WWR8 484 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-220ENST00000555634 MARVELD3Q96A59 401 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 MEGF10Q96KG7 1140 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 SPACA5Q96QH8 159 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 URM1Q9BTM9 101 aaKnown RBP9.53□□□□□ -0.88
SHMT2-220ENST00000555634 CACNG6Q9BXT2 260 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 CNTD2Q9H8S5 307 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 GLS2Q9UI32 602 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 PPP1R3CQ9UQK1 317 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 LAMP3Q9UQV4 416 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 A3GALT2U3KPV4 340 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 HECTD1Q9ULT8 2610 aa9.53□□□□□ -0.88
SHMT2-220ENST00000555634 SPTAN1Q13813 2472 aaKnown RBP9.53□□□□□ -0.88
SHMT2-220ENST00000555634 DYSFO75923 2080 aa9.52□□□□□ -0.88
SHMT2-220ENST00000555634 RELNP78509 3460 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 IGKV1-9A0A0C4DH69 117 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 A0A1B0GWJ7 208 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 METTL21EPA6NDL7 271 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 CRTAPO75718 401 aaPredicted RBP9.52□□□□□ -0.89
SHMT2-220ENST00000555634 ADRA2CP18825 462 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 SERPINA2P20848 420 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 THBS2P35442 1172 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 OR3A4PP47883 348 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 CCL8P80075 99 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 ZNF154Q13106 437 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 PDZK1IP1Q13113 114 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 HFEQ30201 348 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 UBE2NLQ5JXB2 153 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 C1orf100Q5SVJ3 147 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 FOXB2Q5VYV0 432 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms