RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 PITPNAQ00169 270 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 YIF1BQ5BJH7 314 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 RNASE13Q5GAN3 156 aaKnown RBP3.22□□□□□ -1.89
VRK1-205ENST00000555402 CPTPQ5TA50 214 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 BHLHA15Q7RTS1 189 aaPredicted RBP3.22□□□□□ -1.89
VRK1-205ENST00000555402 PLCZ1Q86YW0 608 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 DAW1Q8N136 415 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 CIRBP-AS1Q8TBR5 109 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 OR10C1Q96KK4 312 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 Q96MT0 163 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 SFXN3Q9BWM7 321 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 ANKHQ9HCJ1 492 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 TMEM100Q9NV29 134 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 RBFOX1Q9NWB1 397 aaKnown RBP3.22□□□□□ -1.89
VRK1-205ENST00000555402 STMN3Q9NZ72 180 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 NDRG2Q9UN36 371 aaKnown RBP3.22□□□□□ -1.89
VRK1-205ENST00000555402 PSMD13Q9UNM6 376 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 PPIL1Q9Y3C6 166 aa3.22□□□□□ -1.89
VRK1-205ENST00000555402 PTPRTO14522 1441 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 IGHV7-4-1A0A0J9YVY3 117 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 TMEM150BA6NC51 233 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 LINC01619G3V211 115 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 TRAPPC6AO75865 159 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 CCNE2O96020 404 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 CST4P01036 141 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 SLC35G6P0C7Q6 338 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 HAAOP46952 286 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 HCCSP53701 268 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 TAS2R60P59551 318 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 C2orf54Q08AI8 447 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 C6orf99Q4VX62 202 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 DUPD1Q68J44 220 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 GUSBP11Q6P575 273 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 SHISA6Q6ZSJ9 500 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 CYB561A3Q8NBI2 242 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 OR1S1Q8NH92 325 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 TMEM234Q8WY98 164 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 ANKRD7Q92527 254 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 SLC25A46Q96AG3 418 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 KCNS1Q96KK3 526 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 DOK1Q99704 481 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 SULT4A1Q9BR01 284 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 MAP1LC3CQ9BXW4 147 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 ARV1Q9H2C2 271 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 PSTPIP2Q9H939 334 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 UCK1Q9HA47 277 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 C6orf50Q9HD87 102 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 CLEC2DQ9UHP7 191 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 V9GYY9 64 aa3.21□□□□□ -1.9
VRK1-205ENST00000555402 LRPPRCP42704 1394 aaKnown RBP3.21□□□□□ -1.9
VRK1-205ENST00000555402 A0A0A6YYD5 115 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 E7EWF7 191 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 M0R1X1 148 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 ZMPSTE24O75844 475 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 GATBO75879 557 aaKnown RBP3.2□□□□□ -1.9
VRK1-205ENST00000555402 VAPBO95292 243 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 IGLV3-25P01717 112 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 TRBV12-3P01733 135 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 RPN2P04844 631 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 RHOCP08134 193 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 ARR3P36575 388 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 MTPNP58546 118 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 SLAMF1Q13291 335 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 GNA13Q14344 377 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 NDUFAF6Q330K2 333 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 SLC25A35Q3KQZ1 300 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 COX19Q49B96 90 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 TEX30Q5JUR7 227 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 KHDRBS2Q5VWX1 349 aaKnown RBP3.2□□□□□ -1.9
VRK1-205ENST00000555402 MFSD14CQ5VZR4 134 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 TMEM236Q5W0B7 351 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 STEAP4Q687X5 459 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 SLC7A5P1Q8MH63 180 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 DRAM1Q8N682 238 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 NECAP1Q8NC96 275 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 OR4M1Q8NGD0 313 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 OR13G1Q8NGZ3 307 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 OR51A7Q8NH64 312 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 CPB2Q96IY4 423 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 TSNAXQ99598 290 aaKnown RBP3.2□□□□□ -1.9
VRK1-205ENST00000555402 SPIN2AQ99865 258 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 CTRCQ99895 268 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 RNF5Q99942 180 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 SPIN2BQ9BPZ2 258 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 VCX3AQ9NNX9 186 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 OPN4Q9UHM6 478 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 MRM2Q9UI43 246 aaKnown RBP3.2□□□□□ -1.9
VRK1-205ENST00000555402 FARSAQ9Y285 508 aaKnown RBP3.2□□□□□ -1.9
VRK1-205ENST00000555402 SIGLEC7Q9Y286 467 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 SIGLEC9Q9Y336 463 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 KLF12Q9Y4X4 402 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 PCM1Q15154 2024 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 DOCK9Q9BZ29 2069 aa3.2□□□□□ -1.9
VRK1-205ENST00000555402 IGHV3-49A0A0A0MS15 119 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 IGHV3-72A0A0B4J1Y9 119 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 TRAV8-4A0A0B4J246 113 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 CENPVL3A0A0U1RRI6 287 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 SEC14L6B5MCN3 397 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 RNASEK-C17orf49H0YIS7 233 aa3.19□□□□□ -1.9
VRK1-205ENST00000555402 SMLR1H3BR10 107 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms