RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 OR51G2Q8NGK0 314 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 ZDHHC16Q969W1 377 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 HRASLS5Q96KN8 279 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 APOL4Q9BPW4 351 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 ZNF747Q9BV97 191 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 WDR13Q9H1Z4 485 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 UNKLQ9H9P5 680 aaKnown RBP9.77□□□□□ -0.85
VRK1-204ENST00000555351 ACOXLQ9NUZ1 547 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 NLKQ9UBE8 527 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 MRM2Q9UI43 246 aaKnown RBP9.77□□□□□ -0.85
VRK1-204ENST00000555351 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.77□□□□□ -0.85
VRK1-204ENST00000555351 PIGLQ9Y2B2 252 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 MMP24Q9Y5R2 645 aa9.77□□□□□ -0.85
VRK1-204ENST00000555351 IGHV3OR16-10A0A075B7F0 116 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 TRBV23-1A0A0A0MS06 115 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 A0A1B0GTI1 187 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 A0A1B0GUS0 222 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 METTL15A6NJ78 407 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 J3QT63 122 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 M0R129 80 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 M0R1W7 72 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 AKR7A2O43488 359 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 ALPLP05186 524 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 FAHP16930 419 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 ARF6P62330 175 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 GUCA2AQ02747 115 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 SMIM21Q3B7S5 101 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 CEP78Q5JTW2 689 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 MEDAGQ5VYS4 303 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 PLCXD3Q63HM9 321 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 SHISA2Q6UWI4 295 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 PLEKHG7Q6ZR37 379 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 MOB3CQ70IA8 216 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 KCTD20Q7Z5Y7 419 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 LDLRAD3Q86YD5 345 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 FAM216BQ8N7L0 139 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 POC1AQ8NBT0 407 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 OR14K1Q8NGZ2 314 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 SSMEM1Q8WWF3 244 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 TMIGD2Q96BF3 282 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 C10orf35Q96D05 121 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 SDSLQ96GA7 329 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 GAFA1Q96PS6 74 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 SLC25A10Q9UBX3 287 aaPredicted RBP9.76□□□□□ -0.85
VRK1-204ENST00000555351 ZNF222Q9UK12 451 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 POLDIP2Q9Y2S7 368 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 CAB39Q9Y376 341 aaPredicted RBP9.76□□□□□ -0.85
VRK1-204ENST00000555351 ORC6Q9Y5N6 252 aa9.76□□□□□ -0.85
VRK1-204ENST00000555351 IGKV1D-17A0A075B6S4 117 aa9.75□□□□□ -0.85
VRK1-204ENST00000555351 A0A1W2PQL4 384 aaPredicted RBP9.75□□□□□ -0.85
VRK1-204ENST00000555351 PQLC2LA1A4F0 135 aa9.75□□□□□ -0.85
VRK1-204ENST00000555351 E9PQ18 207 aa9.75□□□□□ -0.85
VRK1-204ENST00000555351 HOXA3O43365 443 aaPredicted RBP9.75□□□□□ -0.85
VRK1-204ENST00000555351 PGA5P0DJD9 388 aa9.75□□□□□ -0.85
VRK1-204ENST00000555351 PSG2P11465 335 aa9.75□□□□□ -0.85
VRK1-204ENST00000555351 MPZP25189 248 aa9.75□□□□□ -0.85
VRK1-204ENST00000555351 POLR2IP36954 125 aaKnown RBP9.75□□□□□ -0.85
VRK1-204ENST00000555351 ISL1P61371 349 aa9.75□□□□□ -0.85
VRK1-204ENST00000555351 SNRPGP62308 76 aaKnown RBP9.75□□□□□ -0.85
VRK1-204ENST00000555351 ACTC1P68032 377 aa9.75□□□□□ -0.85
VRK1-204ENST00000555351 ACTA1P68133 377 aa9.75□□□□□ -0.85
VRK1-204ENST00000555351 CCDC121Q6ZUS5 278 aa9.75□□□□□ -0.85
VRK1-204ENST00000555351 CATSPERDQ86XM0 798 aa9.75□□□□□ -0.85
VRK1-204ENST00000555351 YIPF7Q8N8F6 280 aa9.75□□□□□ -0.85
VRK1-204ENST00000555351 TBC1D15Q8TC07 691 aa9.75□□□□□ -0.85
VRK1-204ENST00000555351 LHX4Q969G2 390 aa9.75□□□□□ -0.85
VRK1-204ENST00000555351 PPP1R14AQ96A00 147 aa9.75□□□□□ -0.85
VRK1-204ENST00000555351 EME1Q96AY2 570 aa9.75□□□□□ -0.85
VRK1-204ENST00000555351 SEH1LQ96EE3 360 aa9.75□□□□□ -0.85
VRK1-204ENST00000555351 PKIBQ9C010 78 aa9.75□□□□□ -0.85
VRK1-204ENST00000555351 SLITRK2Q9H156 845 aa9.75□□□□□ -0.85
VRK1-204ENST00000555351 SEMA6AQ9H2E6 1030 aa9.75□□□□□ -0.85
VRK1-204ENST00000555351 RIBC2Q9H4K1 309 aa9.75□□□□□ -0.85
VRK1-204ENST00000555351 IMPAD1Q9NX62 359 aa9.75□□□□□ -0.85
VRK1-204ENST00000555351 SLC22A13Q9Y226 551 aa9.75□□□□□ -0.85
VRK1-204ENST00000555351 A0A1B0GW55 424 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 SAC3D1A6NKF1 404 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 SNTNA6NMZ2 147 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 RHBDL1O75783 438 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 MELTFP08582 738 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 UBCP0CG48 685 aaKnown RBP9.74□□□□□ -0.85
VRK1-204ENST00000555351 DUX4L2P0CJ85 424 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 DUX4L3P0CJ86 424 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 DUX4L4P0CJ87 422 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 DUX4L5P0CJ88 424 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 DUX4L6P0CJ89 424 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 DUX4L7P0CJ90 424 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 ATP6V1E1P36543 226 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 ALDH3A2P51648 485 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 IKZF1Q13422 519 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 BLMHQ13867 455 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 OCLNQ16625 522 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 DGUOKQ16854 277 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 NCR3LG1Q68D85 454 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 HAGHLQ6PII5 290 aaPredicted RBP9.74□□□□□ -0.85
VRK1-204ENST00000555351 DUX4L9Q6RFH8 374 aaPredicted RBP9.74□□□□□ -0.85
VRK1-204ENST00000555351 ACP7Q6ZNF0 438 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 SSX6Q7RTT6 188 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 VMO1Q7Z5L0 202 aa9.74□□□□□ -0.85
VRK1-204ENST00000555351 ZNF561Q8N587 486 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms