RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 KLF17Q5JT82 389 aaPredicted RBP8.85□□□□□ -0.99
SHMT2-213ENST00000554600 SLC25A30Q5SVS4 291 aa8.85□□□□□ -0.99
SHMT2-213ENST00000554600 DUX4L9Q6RFH8 374 aaPredicted RBP8.85□□□□□ -0.99
SHMT2-213ENST00000554600 BTN2A1Q7KYR7 527 aa8.85□□□□□ -0.99
SHMT2-213ENST00000554600 ENTHD1Q8IYW4 607 aa8.85□□□□□ -0.99
SHMT2-213ENST00000554600 BCL6BQ8N143 479 aaPredicted RBP8.85□□□□□ -0.99
SHMT2-213ENST00000554600 FGFRL1Q8N441 504 aa8.85□□□□□ -0.99
SHMT2-213ENST00000554600 ACBD7Q8N6N7 88 aa8.85□□□□□ -0.99
SHMT2-213ENST00000554600 SIGLECL1Q8N7X8 197 aa8.85□□□□□ -0.99
SHMT2-213ENST00000554600 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.85□□□□□ -0.99
SHMT2-213ENST00000554600 PNLDC1Q8NA58 520 aaKnown RBP8.85□□□□□ -0.99
SHMT2-213ENST00000554600 OR14K1Q8NGZ2 314 aa8.85□□□□□ -0.99
SHMT2-213ENST00000554600 TRMT10AQ8TBZ6 339 aaKnown RBP8.85□□□□□ -0.99
SHMT2-213ENST00000554600 NPRL2Q8WTW4 380 aa8.85□□□□□ -0.99
SHMT2-213ENST00000554600 TMIGD2Q96BF3 282 aa8.85□□□□□ -0.99
SHMT2-213ENST00000554600 C12orf43Q96C57 262 aaKnown RBP8.85□□□□□ -0.99
SHMT2-213ENST00000554600 MRPL48Q96GC5 212 aaKnown RBP8.85□□□□□ -0.99
SHMT2-213ENST00000554600 OR51I2Q9H344 312 aa8.85□□□□□ -0.99
SHMT2-213ENST00000554600 FAM118AQ9NWS6 357 aa8.85□□□□□ -0.99
SHMT2-213ENST00000554600 KAAG1Q9UBP8 84 aa8.85□□□□□ -0.99
SHMT2-213ENST00000554600 DUX4Q9UBX2 424 aa8.85□□□□□ -0.99
SHMT2-213ENST00000554600 SLC7A11Q9UPY5 501 aa8.85□□□□□ -0.99
SHMT2-213ENST00000554600 PCDHGB1Q9Y5G3 927 aa8.85□□□□□ -0.99
SHMT2-213ENST00000554600 V9GYS6 101 aa8.85□□□□□ -0.99
SHMT2-213ENST00000554600 LOC107986453A0A1B0GWG9 222 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 FAM230AA0A1W2PPH8 454 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 ANKRD61A6NGH8 418 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 OR2AT4A6NND4 320 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 ZNF879B4DU55 563 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 ANKRD65E5RJM6 399 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 J3QLW9 94 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 DLGAP1O14490 977 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 TNFRSF13BO14836 293 aaPredicted RBP8.84□□□□□ -0.99
SHMT2-213ENST00000554600 TOX4O94842 621 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 ECDO95905 644 aaPredicted RBP8.84□□□□□ -0.99
SHMT2-213ENST00000554600 LIPFP07098 398 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 UBCP0CG48 685 aaKnown RBP8.84□□□□□ -0.99
SHMT2-213ENST00000554600 ZNF19P17023 458 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 NDUFB7P17568 137 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 CAPZA1P52907 286 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 OR12D2P58182 307 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 ARF6P62330 175 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 IL13RA1P78552 427 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 RCN1Q15293 331 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 FAM76BQ5HYJ3 339 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 GPR157Q5UAW9 335 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 METTL11BQ5VVY1 283 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 STUMQ69YW2 141 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 USP43Q70EL4 1123 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 KCTD20Q7Z5Y7 419 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 LHFPL3Q86UP9 236 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 ZNF573Q86YE8 665 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 BATF2Q8N1L9 274 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 PRSS35Q8N3Z0 413 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 TMEM185AQ8NFB2 350 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 CYGBQ8WWM9 190 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 AQP3Q92482 292 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 UPRTQ96BW1 309 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 LGALS12Q96DT0 336 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 MED30Q96HR3 178 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 ZNF488Q96MN9 340 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 MYCBPQ99417 103 aaPredicted RBP8.84□□□□□ -0.99
SHMT2-213ENST00000554600 SMPD3Q9NY59 655 aaPredicted RBP8.84□□□□□ -0.99
SHMT2-213ENST00000554600 ONECUT1Q9UBC0 465 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 NLKQ9UBE8 527 aa8.84□□□□□ -0.99
SHMT2-213ENST00000554600 ANK2Q01484 3957 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 DHRS7CA6NNS2 312 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 J3QT63 122 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 SLC16A6O15403 523 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 SYNGR1O43759 233 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 GATBO75879 557 aaKnown RBP8.83□□□□□ -1
SHMT2-213ENST00000554600 INMTO95050 263 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 NXPH2O95156 264 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 FADS2O95864 444 aaKnown RBP8.83□□□□□ -1
SHMT2-213ENST00000554600 PLATP00750 562 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 SERPINA3P01011 423 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 SFTPBP07988 381 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 OCM2P0CE71 109 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 OCMP0CE72 109 aaPredicted RBP8.83□□□□□ -1
SHMT2-213ENST00000554600 PPIAL4GP0DN37 164 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 DBTP11182 482 aaKnown RBP8.83□□□□□ -1
SHMT2-213ENST00000554600 SELLP14151 372 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 ZNF20P17024 532 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 CCL1P22362 96 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 KIR3DL2P43630 455 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 ACTA2P62736 377 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 ACTG2P63267 376 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 BAMBIQ13145 260 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 SMIM21Q3B7S5 101 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 CDONQ4KMG0 1287 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 TMEM244Q5VVB8 128 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 LPCAT4Q643R3 524 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 BRD3OSQ6XYD6 125 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 RDH10Q8IZV5 341 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 OR2G2Q8NGZ5 317 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 RHOXF1Q8NHV9 184 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 DACT3Q96B18 629 aaPredicted RBP8.83□□□□□ -1
SHMT2-213ENST00000554600 C4orf36Q96KX1 117 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 WDFY2Q96P53 400 aa8.83□□□□□ -1
SHMT2-213ENST00000554600 GAFA1Q96PS6 74 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms