RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 PRDM4Q9UKN5 801 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 NDUFAF1Q9Y375 327 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 USH1CQ9Y6N9 552 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 CAPN7Q9Y6W3 813 aa2.51□□□□□ -2.01
SLIRP-202ENST00000553981 TENM2Q9NT68 2774 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 NOTCH1P46531 2555 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 TRBV5-7A0A0A0MS05 114 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 TEX13CA0A0J9YWL9 993 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 A0A1W2PRG6 482 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 TMEM120BA0PK00 339 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 MEX3AA1L020 520 aaKnown RBP2.5□□□□□ -2.01
SLIRP-202ENST00000553981 PRSS37A4D1T9 235 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 OOEPA6NGQ2 149 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 NPIPB13A6NJU9 1138 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 C5orf58C9J3I9 102 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 NPIPB4C9JG80 1138 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 NPFFO15130 113 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 ENSAO43768 121 aaKnown RBP2.5□□□□□ -2.01
SLIRP-202ENST00000553981 KRT36O76013 467 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 OR6A2O95222 327 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 SNRNP70P08621 437 aaKnown RBP2.5□□□□□ -2.01
SLIRP-202ENST00000553981 SLC2A1P11166 492 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 IFI30P13284 250 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 IDO1P14902 403 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 GGT2P36268 569 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 GPR4P46093 362 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 OMPP47874 163 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 SLC9A3P48764 834 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 RPL15P61313 204 aaKnown RBP2.5□□□□□ -2.01
SLIRP-202ENST00000553981 PRKCDQ05655 676 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 EGFEM1PQ0D2K5 195 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 HNF4GQ14541 408 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 MOGQ16653 247 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 CDONQ4KMG0 1287 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 AGKQ53H12 422 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 GLYATL3Q5SZD4 288 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 BEND6Q5SZJ8 279 aaPredicted RBP2.5□□□□□ -2.01
SLIRP-202ENST00000553981 DHRS7BQ6IAN0 325 aaPredicted RBP2.5□□□□□ -2.01
SLIRP-202ENST00000553981 METAP1DQ6UB28 335 aaPredicted RBP2.5□□□□□ -2.01
SLIRP-202ENST00000553981 WDR82Q6UXN9 313 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 BAIAP2L2Q6UXY1 529 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 GDPGP1Q6ZNW5 385 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 TCF23Q7RTU1 214 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 PRSS45Q7RTY3 260 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 VTCN1Q7Z7D3 282 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 DPPA2Q7Z7J5 298 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.5□□□□□ -2.01
SLIRP-202ENST00000553981 EGFL6Q8IUX8 553 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 NRMQ8IXM6 262 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 MKXQ8IYA7 352 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 OR6V1Q8N148 313 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 Q8N2B8 174 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 PCYOX1LQ8NBM8 494 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 OR13G1Q8NGZ3 307 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 C8orf46Q8TAG6 207 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 TMED6Q8WW62 240 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 TLCD1Q96CP7 247 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 ZNF583Q96ND8 569 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 GAFA1Q96PS6 74 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 OR5M11Q96RB7 305 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 ZBTB18Q99592 522 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 SSX3Q99909 188 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 PAIP2Q9BPZ3 127 aaKnown RBP2.5□□□□□ -2.01
SLIRP-202ENST00000553981 FUZQ9BT04 418 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 DCTN5Q9BTE1 182 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 ALG12Q9BV10 488 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 CDCA4Q9BXL8 241 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 SLC19A3Q9BZV2 496 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 SYT4Q9H2B2 425 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 LRMDAQ9H2I8 198 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 EVA1AQ9H8M9 152 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 SP140LQ9H930 580 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 PPCSQ9HAB8 311 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 ELOVL3Q9HB03 270 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 TMEM100Q9NV29 134 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 THAP1Q9NVV9 213 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 C1orf123Q9NWV4 160 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 KAAG1Q9UBP8 84 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 RPS6KA6Q9UK32 745 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 PRPF19Q9UMS4 504 aaKnown RBP2.5□□□□□ -2.01
SLIRP-202ENST00000553981 B9D1Q9UPM9 204 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 SIGLEC7Q9Y286 467 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 SH3GLB1Q9Y371 365 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 MAB21L2Q9Y586 359 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 CSMD3Q7Z407 3707 aa2.5□□□□□ -2.01
SLIRP-202ENST00000553981 VPS13DQ5THJ4 4388 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 OR6C68A6NDL8 312 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 A6NDX4 124 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 CD300LBA8K4G0 201 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 F5H5K5 113 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 BUB3O43684 328 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 SLC16A7O60669 478 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 RHBDL1O75783 438 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 MMP23AO75900 390 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 DIRAS1O95057 198 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 OR5F1O95221 314 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 IGF2P01344 180 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 CD14P08571 375 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 CCDC159P0C7I6 412 aa2.49□□□□□ -2.01
SLIRP-202ENST00000553981 CLUP10909 449 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms