RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 TMEM120BA0PK00 339 aa10.91□□□□□ -0.66
PRPF39-204ENST00000553605 RFPL4AA6NLU0 287 aa10.91□□□□□ -0.66
PRPF39-204ENST00000553605 RFPL4AL1F8VTS6 287 aa10.91□□□□□ -0.66
PRPF39-204ENST00000553605 SLC1A7O00341 560 aa10.91□□□□□ -0.66
PRPF39-204ENST00000553605 MTRF1O75570 445 aaKnown RBP10.91□□□□□ -0.66
PRPF39-204ENST00000553605 ANXA2P07355 339 aaKnown RBP10.91□□□□□ -0.66
PRPF39-204ENST00000553605 FRMD6-AS1P0C7T7 363 aa10.91□□□□□ -0.66
PRPF39-204ENST00000553605 PIPP12273 146 aaPredicted RBP10.91□□□□□ -0.66
PRPF39-204ENST00000553605 HIST1H1CP16403 213 aaKnown RBP10.91□□□□□ -0.66
PRPF39-204ENST00000553605 CFL1P23528 166 aaKnown RBP10.91□□□□□ -0.66
PRPF39-204ENST00000553605 OR3A4PP47883 348 aa10.91□□□□□ -0.66
PRPF39-204ENST00000553605 PRDX4Q13162 271 aa10.91□□□□□ -0.66
PRPF39-204ENST00000553605 KLHL12Q53G59 568 aa10.91□□□□□ -0.66
PRPF39-204ENST00000553605 PLBD1Q6P4A8 553 aa10.91□□□□□ -0.66
PRPF39-204ENST00000553605 MREGQ8N565 214 aa10.91□□□□□ -0.66
PRPF39-204ENST00000553605 CD177Q8N6Q3 437 aa10.91□□□□□ -0.66
PRPF39-204ENST00000553605 FGF23Q9GZV9 251 aaPredicted RBP10.91□□□□□ -0.66
PRPF39-204ENST00000553605 FN3KQ9H479 309 aa10.91□□□□□ -0.66
PRPF39-204ENST00000553605 LYVE1Q9Y5Y7 322 aa10.91□□□□□ -0.66
PRPF39-204ENST00000553605 OR6C68A6NDL8 312 aa10.9□□□□□ -0.66
PRPF39-204ENST00000553605 OR2F2O95006 317 aa10.9□□□□□ -0.66
PRPF39-204ENST00000553605 RBP4P02753 201 aa10.9□□□□□ -0.66
PRPF39-204ENST00000553605 ZNF728P0DKX0 622 aa10.9□□□□□ -0.66
PRPF39-204ENST00000553605 PRDX2P32119 198 aa10.9□□□□□ -0.66
PRPF39-204ENST00000553605 BRS3P32247 399 aa10.9□□□□□ -0.66
PRPF39-204ENST00000553605 ACTA2P62736 377 aa10.9□□□□□ -0.66
PRPF39-204ENST00000553605 ACTG2P63267 376 aa10.9□□□□□ -0.66
PRPF39-204ENST00000553605 ACTC1P68032 377 aa10.9□□□□□ -0.66
PRPF39-204ENST00000553605 ACTA1P68133 377 aa10.9□□□□□ -0.66
PRPF39-204ENST00000553605 IL18R1Q13478 541 aa10.9□□□□□ -0.66
PRPF39-204ENST00000553605 ERICH5Q6P6B1 374 aa10.9□□□□□ -0.66
PRPF39-204ENST00000553605 SMARCD3Q6STE5 483 aa10.9□□□□□ -0.66
PRPF39-204ENST00000553605 ZNF671Q8TAW3 534 aa10.9□□□□□ -0.66
PRPF39-204ENST00000553605 PIGCQ92535 297 aa10.9□□□□□ -0.66
PRPF39-204ENST00000553605 ZBTB9Q96C00 473 aa10.9□□□□□ -0.66
PRPF39-204ENST00000553605 SLAMF6Q96DU3 332 aa10.9□□□□□ -0.66
PRPF39-204ENST00000553605 CDRT15Q96T59 188 aa10.9□□□□□ -0.66
PRPF39-204ENST00000553605 SH3GL1Q99961 368 aa10.9□□□□□ -0.66
PRPF39-204ENST00000553605 TMEM120AQ9BXJ8 343 aa10.9□□□□□ -0.66
PRPF39-204ENST00000553605 ABCB9Q9NP78 766 aa10.9□□□□□ -0.66
PRPF39-204ENST00000553605 TBC1D23Q9NUY8 699 aa10.9□□□□□ -0.66
PRPF39-204ENST00000553605 TVP23AA6NH52 213 aa10.89□□□□□ -0.67
PRPF39-204ENST00000553605 UNC119BA6NIH7 251 aa10.89□□□□□ -0.67
PRPF39-204ENST00000553605 ARPC3O15145 178 aa10.89□□□□□ -0.67
PRPF39-204ENST00000553605 SLC22A2O15244 555 aa10.89□□□□□ -0.67
PRPF39-204ENST00000553605 PSKH1P11801 424 aa10.89□□□□□ -0.67
PRPF39-204ENST00000553605 OMPP47874 163 aa10.89□□□□□ -0.67
PRPF39-204ENST00000553605 CX3CR1P49238 355 aa10.89□□□□□ -0.67
PRPF39-204ENST00000553605 VEGFCP49767 419 aa10.89□□□□□ -0.67
PRPF39-204ENST00000553605 VSNL1P62760 191 aa10.89□□□□□ -0.67
PRPF39-204ENST00000553605 CYLC2Q14093 348 aaPredicted RBP10.89□□□□□ -0.67
PRPF39-204ENST00000553605 GFOD2Q3B7J2 385 aa10.89□□□□□ -0.67
PRPF39-204ENST00000553605 ZNF260Q3ZCT1 412 aa10.89□□□□□ -0.67
PRPF39-204ENST00000553605 VTCN1Q7Z7D3 282 aa10.89□□□□□ -0.67
PRPF39-204ENST00000553605 TIGD4Q8IY51 512 aa10.89□□□□□ -0.67
PRPF39-204ENST00000553605 HPSE2Q8WWQ2 592 aa10.89□□□□□ -0.67
PRPF39-204ENST00000553605 HIST1H2AAQ96QV6 131 aa10.89□□□□□ -0.67
PRPF39-204ENST00000553605 ANKRD19PQ9H560 264 aa10.89□□□□□ -0.67
PRPF39-204ENST00000553605 RASL12Q9NYN1 266 aa10.89□□□□□ -0.67
PRPF39-204ENST00000553605 FRAS1Q86XX4 4008 aa10.89□□□□□ -0.67
PRPF39-204ENST00000553605 MEX3AA1L020 520 aaKnown RBP10.88□□□□□ -0.67
PRPF39-204ENST00000553605 ZNF878C9JN71 531 aa10.88□□□□□ -0.67
PRPF39-204ENST00000553605 M0QZK8 103 aa10.88□□□□□ -0.67
PRPF39-204ENST00000553605 CST4P01036 141 aa10.88□□□□□ -0.67
PRPF39-204ENST00000553605 TK1P04183 234 aa10.88□□□□□ -0.67
PRPF39-204ENST00000553605 HTR1DP28221 377 aa10.88□□□□□ -0.67
PRPF39-204ENST00000553605 PYCR1P32322 319 aa10.88□□□□□ -0.67
PRPF39-204ENST00000553605 GPM6AP51674 278 aa10.88□□□□□ -0.67
PRPF39-204ENST00000553605 EIF2B1Q14232 305 aaKnown RBP10.88□□□□□ -0.67
PRPF39-204ENST00000553605 ACP7Q6ZNF0 438 aa10.88□□□□□ -0.67
PRPF39-204ENST00000553605 FAM57BQ71RH2 274 aa10.88□□□□□ -0.67
PRPF39-204ENST00000553605 EGFL6Q8IUX8 553 aa10.88□□□□□ -0.67
PRPF39-204ENST00000553605 TSPEARQ8WU66 669 aa10.88□□□□□ -0.67
PRPF39-204ENST00000553605 CHPT1Q8WUD6 406 aa10.88□□□□□ -0.67
PRPF39-204ENST00000553605 NOL4LQ96MY1 436 aaPredicted RBP10.88□□□□□ -0.67
PRPF39-204ENST00000553605 OR51I2Q9H344 312 aa10.88□□□□□ -0.67
PRPF39-204ENST00000553605 ZNF319Q9P2F9 582 aa10.88□□□□□ -0.67
PRPF39-204ENST00000553605 IGHV2-26A0A0B4J1V2 119 aa10.87□□□□□ -0.67
PRPF39-204ENST00000553605 SASH3O75995 380 aa10.87□□□□□ -0.67
PRPF39-204ENST00000553605 SPARCP09486 303 aa10.87□□□□□ -0.67
PRPF39-204ENST00000553605 SLC6A6P31641 620 aa10.87□□□□□ -0.67
PRPF39-204ENST00000553605 SLC15A1P46059 708 aa10.87□□□□□ -0.67
PRPF39-204ENST00000553605 GRB2P62993 217 aaKnown RBP10.87□□□□□ -0.67
PRPF39-204ENST00000553605 DEFB136Q30KP8 78 aa10.87□□□□□ -0.67
PRPF39-204ENST00000553605 LYPD4Q6UWN0 246 aa10.87□□□□□ -0.67
PRPF39-204ENST00000553605 LHFPL2Q6ZUX7 228 aa10.87□□□□□ -0.67
PRPF39-204ENST00000553605 PRSS45Q7RTY3 260 aa10.87□□□□□ -0.67
PRPF39-204ENST00000553605 ZDHHC23Q8IYP9 409 aa10.87□□□□□ -0.67
PRPF39-204ENST00000553605 LINC00471Q8N535 108 aa10.87□□□□□ -0.67
PRPF39-204ENST00000553605 COMMD1Q8N668 190 aa10.87□□□□□ -0.67
PRPF39-204ENST00000553605 OR4Q3Q8NH05 313 aa10.87□□□□□ -0.67
PRPF39-204ENST00000553605 OR8U1Q8NH10 309 aa10.87□□□□□ -0.67
PRPF39-204ENST00000553605 TM2D3Q9BRN9 247 aa10.87□□□□□ -0.67
PRPF39-204ENST00000553605 OR10A2Q9H208 303 aa10.87□□□□□ -0.67
PRPF39-204ENST00000553605 DCLRE1BQ9H816 532 aa10.87□□□□□ -0.67
PRPF39-204ENST00000553605 ZNF732B4DXR9 585 aa10.86□□□□□ -0.67
PRPF39-204ENST00000553605 DNAJC8O75937 253 aaPredicted RBP10.86□□□□□ -0.67
PRPF39-204ENST00000553605 ACKR3P25106 362 aa10.86□□□□□ -0.67
PRPF39-204ENST00000553605 HSD11B1P28845 292 aa10.86□□□□□ -0.67
PRPF39-204ENST00000553605 ARHGDIBP52566 201 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms