RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 KCNK7Q9Y2U2 307 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF175Q9Y473 711 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 TRGV5A0A0B4J1U4 118 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 hCG_38984A0A1B0GV85 526 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 UBE2QL1A1L167 161 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 ARGFXA6NJG6 315 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 FAM166BA8MTA8 275 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 HMSDA8MTL9 139 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 SERPINE3A8MV23 424 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 PRSS44E7EML9 344 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 ZNF587BE7ETH6 402 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 G3V3Q6 166 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 H3BUI4 141 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 MFNGO00587 321 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 SOCS1O15524 211 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 SSNA1O43805 119 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 SSX5O60225 188 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 SS18L1O75177 396 aaPredicted RBP5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 ZNF780AO75290 641 aaPredicted RBP5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 CEACAM4O75871 244 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 CNOT4O95628 575 aaKnown RBP5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 MPIG6BO95866 241 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 NRASP01111 189 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 LCATP04180 440 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 SERPINA5P05154 406 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 GSTT2P0CG29 244 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 FCGR2AP12318 317 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 B4GALT1P15291 398 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 HIST1H1DP16402 221 aaKnown RBP5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 GNB3P16520 340 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 FAHP16930 419 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 ANXA7P20073 488 aaKnown RBP5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 DNASE1P24855 282 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 MPGP29372 298 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 ARR3P36575 388 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 PMELP40967 661 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 NBL1P41271 181 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 OR3A4PP47883 348 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 HTR5AP47898 357 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 FUT6P51993 359 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 UBE2MP61081 183 aaKnown RBP5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 ARF1P84077 181 aaKnown RBP5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 GK2Q14410 553 aaPredicted RBP5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 RTP5Q14D33 572 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 CNN3Q15417 329 aaKnown RBP5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 TGIF1Q15583 401 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 ACTBL2Q562R1 376 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 PABPC1L2AQ5JQF8 200 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 PLAC9Q5JTB6 97 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 VAX1Q5SQQ9 334 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 FAAP20Q6NZ36 180 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 IDO2Q6ZQW0 420 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 LHFPL2Q6ZUX7 228 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 ZNF767PQ75MW2 155 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 NLRC3Q7RTR2 1065 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 C1QL2Q7Z5L3 287 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 TRAPPC6BQ86SZ2 158 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 SLC25A42Q86VD7 318 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 C9orf62Q8N4C0 152 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 ZSCAN4Q8NAM6 433 aaPredicted RBP5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 CHST4Q8NCG5 386 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 CPEB3Q8NE35 698 aaKnown RBP5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 OR2AK2Q8NG84 335 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 OR11H4Q8NGC9 324 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 OR13C8Q8NGS7 320 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 AKR7LQ8NHP1 331 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 FNDC9Q8TBE3 224 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 ZNF431Q8TF32 576 aaPredicted RBP5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 ST8SIA4Q92187 359 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 DVL3Q92997 716 aaPredicted RBP5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 PIGTQ969N2 578 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 RAB3CQ96E17 227 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 ALKBH3Q96Q83 286 aaPredicted RBP5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 GPER1Q99527 375 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 NKX3-1Q99801 234 aaPredicted RBP5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 GAL3ST1Q99999 423 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 SEC22CQ9BRL7 303 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 TINAGL1Q9GZM7 467 aaPredicted RBP5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 CHST6Q9GZX3 395 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 PCDHB16Q9NRJ7 776 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 PLSCR3Q9NRY6 295 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 IL36GQ9NZH8 169 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 MYEF2Q9P2K5 600 aaKnown RBP5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 MGAT4CQ9UBM8 478 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 ELF5Q9UKW6 265 aaPredicted RBP5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 MGAT4AQ9UM21 535 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 PLEKHA6Q9Y2H5 1048 aa5.21□□□□□ -1.58
VIPAS39-204ENST00000553576 HEATR1Q9H583 2144 aaKnown RBP5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 LOC100509620A0A075B734 347 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 TRAV17A0A0B4J275 112 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 ZNF816-ZNF321PA0A0X1KG74 233 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 SPAARA0A1B0GVQ0 90 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 PLSCR5A0PG75 271 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 TMEM82A0PJX8 343 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 MEIS3P1A6NDR6 274 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 NKX2-8O15522 239 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 TPD52L2O43399 206 aaKnown RBP5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 CRTAPO75718 401 aaPredicted RBP5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 CST4P01036 141 aa5.2□□□□□ -1.58
VIPAS39-204ENST00000553576 AMY2AP04746 511 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms