RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 WNT5BQ9H1J7 359 aa3.98□□□□□ -1.77
ATXN3-222ENST00000553570 C1orf198Q9H425 327 aa3.98□□□□□ -1.77
ATXN3-222ENST00000553570 RIBC2Q9H4K1 309 aa3.98□□□□□ -1.77
ATXN3-222ENST00000553570 ELOVL3Q9HB03 270 aa3.98□□□□□ -1.77
ATXN3-222ENST00000553570 NOX4Q9NPH5 578 aa3.98□□□□□ -1.77
ATXN3-222ENST00000553570 HIF1ANQ9NWT6 349 aa3.98□□□□□ -1.77
ATXN3-222ENST00000553570 IL20Q9NYY1 176 aa3.98□□□□□ -1.77
ATXN3-222ENST00000553570 TREM2Q9NZC2 230 aa3.98□□□□□ -1.77
ATXN3-222ENST00000553570 PTTG3PQ9NZH4 202 aa3.98□□□□□ -1.77
ATXN3-222ENST00000553570 ZNF224Q9NZL3 707 aa3.98□□□□□ -1.77
ATXN3-222ENST00000553570 CRNNQ9UBG3 495 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-222ENST00000553570 BAIAP2Q9UQB8 552 aa3.98□□□□□ -1.77
ATXN3-222ENST00000553570 LOC100509620A0A075B734 347 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 M0R233 179 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 BHLHE40O14503 412 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 ARPC3O15145 178 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 SYNGR3O43761 229 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 TLX2O43763 284 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-222ENST00000553570 MGRN1O60291 552 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 TXNDC12O95881 172 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 NGFP01138 241 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 IGHV4-39P01824 125 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 MRPL3P09001 348 aaKnown RBP3.97□□□□□ -1.77
ATXN3-222ENST00000553570 MMP7P09237 267 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-222ENST00000553570 DAOP14920 347 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 HSD11B1P28845 292 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 BDKRB2P30411 391 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 ATP6V1E1P36543 226 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 PDLIM4P50479 330 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 PRKXP51817 358 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 EFNA4P52798 201 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 HCCSP53701 268 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 KLF3P57682 345 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-222ENST00000553570 NANOS2P60321 138 aaKnown RBP3.97□□□□□ -1.77
ATXN3-222ENST00000553570 LSM6P62312 80 aaKnown RBP3.97□□□□□ -1.77
ATXN3-222ENST00000553570 CCL8P80075 99 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 TNK1Q13470 666 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 AQP6Q13520 282 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 APOFQ13790 326 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 GGTLC2Q14390 218 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 GK3PQ14409 553 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 PTGES3Q15185 160 aaKnown RBP3.97□□□□□ -1.77
ATXN3-222ENST00000553570 ATP6AP1Q15904 470 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 MOGQ16653 247 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 CCDC92Q53HC0 331 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-222ENST00000553570 ELFN2Q5R3F8 820 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 KCTD18Q6PI47 426 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-222ENST00000553570 ASRGL1Q7L266 308 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 DCXRQ7Z4W1 244 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 NAA40Q86UY6 237 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 ZNF584Q8IVC4 421 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 OR5AS1Q8N127 324 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 LRRC75A-AS1Q8N1F1 130 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 ZNF525Q8N782 197 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 ZNF283Q8N7M2 679 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 TCEANCQ8N8B7 351 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 PAPD5Q8NDF8 572 aaKnown RBP3.97□□□□□ -1.77
ATXN3-222ENST00000553570 OR5L1Q8NGL2 311 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 OR6N2Q8NGY6 317 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 ZNRF4Q8WWF5 429 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 SPTSSAQ969W0 71 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 MRPL24Q96A35 216 aaKnown RBP3.97□□□□□ -1.77
ATXN3-222ENST00000553570 ZMYND19Q96E35 227 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-222ENST00000553570 NRBF2Q96F24 287 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 CENPNQ96H22 339 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-222ENST00000553570 POM121L2Q96KW2 1035 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 IL4I1Q96RQ9 567 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 GPX7Q96SL4 187 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-222ENST00000553570 DOK1Q99704 481 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 CIB1Q99828 191 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 SMR3AQ99954 134 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 PKP2Q99959 881 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 MRPL37Q9BZE1 423 aaKnown RBP3.97□□□□□ -1.77
ATXN3-222ENST00000553570 BCL2L14Q9BZR8 327 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 OR2J1Q9GZK6 312 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 NARFLQ9H6Q4 476 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 WDR76Q9H967 626 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 NTN4Q9HB63 628 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.97□□□□□ -1.77
ATXN3-222ENST00000553570 DNAJC27Q9NZQ0 273 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 STARD10Q9Y365 291 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 FKBP7Q9Y680 259 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 ABCA1O95477 2261 aa3.97□□□□□ -1.77
ATXN3-222ENST00000553570 ACANP16112 2415 aa3.96□□□□□ -1.77
ATXN3-222ENST00000553570 NBPF19A0A087WUL8 3843 aa3.96□□□□□ -1.78
ATXN3-222ENST00000553570 IGLV1-36A0A0B4J1U3 117 aa3.96□□□□□ -1.78
ATXN3-222ENST00000553570 IGHV3-64DA0A0J9YX35 117 aa3.96□□□□□ -1.78
ATXN3-222ENST00000553570 TMEM129A0AVI4 362 aa3.96□□□□□ -1.78
ATXN3-222ENST00000553570 OR6C6A6NF89 314 aa3.96□□□□□ -1.78
ATXN3-222ENST00000553570 GGT3PA6NGU5 568 aa3.96□□□□□ -1.78
ATXN3-222ENST00000553570 M0R129 80 aa3.96□□□□□ -1.78
ATXN3-222ENST00000553570 SPINT2O43291 252 aa3.96□□□□□ -1.78
ATXN3-222ENST00000553570 PPIHO43447 177 aaKnown RBP3.96□□□□□ -1.78
ATXN3-222ENST00000553570 PLPP2O43688 288 aa3.96□□□□□ -1.78
ATXN3-222ENST00000553570 SELENOFO60613 162 aa3.96□□□□□ -1.78
ATXN3-222ENST00000553570 GLCEO94923 617 aa3.96□□□□□ -1.78
ATXN3-222ENST00000553570 ALPLP05186 524 aa3.96□□□□□ -1.78
ATXN3-222ENST00000553570 H2BFMP0C1H6 154 aa3.96□□□□□ -1.78
ATXN3-222ENST00000553570 SPI1P17947 270 aa3.96□□□□□ -1.78
ATXN3-222ENST00000553570 IGFBP5P24593 272 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms